LOCUS AK299202 3123 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59741 complete cds, highly similar to Mus
musculus TOX high mobility group box family member 3 (Tox3), mRNA.
ACCESSION AK299202
VERSION AK299202.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3123)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3123
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7007683"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000493826"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 189..1904
/codon_start=1
/note="highly similar to Mus musculus TOX high mobility
group box family member 3 (Tox3), mRNA"
/protein_id="BAG61242.1"
/transl_table=1
/translation="MKCQPRSGARRIEERLHYLITTYLKFGNNNNYMNMAEANNAFFA
ASETFHTPSLGDEEFEIPPITPPPESDPALGMPDVLLPFQALSDPLPSQGSEFTPQFP
PQSLDLPSITISRNLVEQDGVLHSSGLHMDQSHTQVSQYRQDPSLIMRSIVHMTDAAR
SGVMPPAQLTTINQSQLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADE
ANRAIGEKRAAPDSGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT
FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQT
IRSVQQTLASTNLTSSLLLNTPLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQI
VTSVTIAANMPSNIGAPLISSMGTTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQ
MQQMQQQQLQQHQMHQQIQQQMQQQHFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQR
LQLQQLQHMQHQSQPSPRQHSPVASQITSPIPAIGSPQPASQQHQSQIQSQTQTQVLS
QVSIF"
BASE COUNT 969 a 778 c 609 g 767 t
ORIGIN
1 gaaccgacac gaggcttcac ctgggaagct tcaagtctgc ctacctgtga aaggtcaggc
61 cccaacaccc cttctgggaa atcctacagc taggatgcat ttctctcact gaaccccatc
121 cagcagagga cagaagagtc agaagagggt agagaggatt tagatactca tagaagatgt
181 agtggaggat gaagtgccaa cctcgctcgg gagccaggcg cattgaggag agacttcatt
241 acctgataac tacctatctg aaatttggaa ataataataa ctatatgaat atggctgagg
301 cgaacaatgc gttcttcgct gccagtgaga cattccacac accaagcctt ggggacgagg
361 aattcgaaat tccaccaatc acgcctcctc cagagtcaga ccctgcccta ggcatgccgg
421 atgtactgct accctttcaa gccctcagcg atccattgcc ttcccaggga agtgaattca
481 caccccagtt tccccctcaa agcctggacc tcccttccat tacaatctca agaaatctcg
541 tggaacaaga tggcgtgctt catagcagtg ggttgcatat ggatcagagc cacacacaag
601 tgtcccagta ccggcaggat ccctccctga tcatgcggtc catcgtccac atgaccgatg
661 ctgcgcgttc tggggtcatg cctcctgccc agctcaccac catcaaccag tctcagctca
721 gcgcccagtt ggggttgaat ttgggaggtg ccagtatgcc tcacacatct ccttcacctc
781 cagcaagcaa atcagccact ccctcccctt ccagctccat caatgaagag gatgctgatg
841 aagccaacag agccattgga gagaaaagag ctgctccaga ctctggcaag aagcccaaga
901 ctccaaagaa aaagaaaaag aaagatccca atgagccaca gaagccagtg tcagcatatg
961 ccctgttttt cagagacaca caggctgcaa ttaaaggtca aaaccccaat gcaacctttg
1021 gagaggtctc aaaaattgta gcatctatgt gggacagcct tggagaagaa caaaagcagg
1081 tatataaaag gaaaacagaa gctgccaaaa aagaatacct gaaggccctg gcggcataca
1141 gggccagcct cgtttctaag gctgctgctg agtcagcaga agcccagacc atccgttctg
1201 ttcagcagac cctggcgtcg accaatctaa catcctctct ccttctcaac actccactgt
1261 ctcaacatgg aacagtgtca gcatcacctc agactctcca gcaatccctc cctaggtcaa
1321 tcgctcccaa acccttaacc atgagactcc ccatgaacca gattgtcaca tcagtcacca
1381 ttgcagccaa catgccctcg aacattgggg ctccactgat aagctccatg ggaacgacca
1441 tggttggctc agcaccctcc acccaagtga gtccttcggt gcaaacccag cagcatcaga
1501 tgcaattgca gcagcagcag cagcagcaac aacaacagat gcaacagatg cagcagcagc
1561 aactccagca gcaccaaatg catcagcaaa tccagcagca gatgcagcag cagcatttcc
1621 agcaccacat gcagcagcac ctgcagcagc agcagcagca tctccagcag caaattaatc
1681 aacagcagct gcagcagcag ctgcagcagc gcctccagct gcagcagctg caacacatgc
1741 agcaccagtc tcagccttct cctcggcagc actcccctgt cgcctctcag ataacatccc
1801 ccatccctgc catcgggagc ccccagccag cctctcagca gcaccagtcg caaatacagt
1861 ctcagacaca gactcaagta ttatcgcagg tcagtatttt ctgaagacgc atatggcaga
1921 cggatttgcg tataccaagg agagtggcat aggagggaaa agcatatgtg gctgaaacct
1981 gtaagttggt gttggttatg cagaaatgtg taacagatca aacggtcctc tcaagtgtct
2041 attagatagg caataagaac tgcagtgtag ctgagtaaca tcttttagct gactataaat
2101 cactttgttt ttaaacaaga aaagctgtgc tcttttatgt gatgcctttt ttatttattc
2161 aggctatacc tacaatatgt gaatcaaact gtttaatgaa tcctgggaca tactgatgac
2221 tataaactgg cctctctgag tcatagaaaa atggccttat ttctccagaa gtgagtaaac
2281 cacacttcca ggctatctga actcctgaag ccctaaaaat aaaaagcaca gttgtaacta
2341 cctgaaatat gaagatccag tttcatacaa acatttgtat gacgtgaata gttgatggca
2401 tttttttgtc atgaaaaaaa taatgtaaat cacagacttt tgccaaagct cttatttttt
2461 ttcctaaatc tctccagaaa aaaaatgcaa gtgactaaat tcaattattg actaatttcc
2521 actttttatc catgacttct ccaaatcaaa ccacagtata tgttgtaaca atatctatga
2581 ccactgttag cccattatat tcattccaat tagaagaaat gtgaatacta tattccgtgt
2641 tttgagtgac aagtttcgaa aaataaaaac actgtatttt taaaagggaa atgcacttaa
2701 atgaaaacag ttattacaaa agttaagatt taaaaagaaa aagcaagagt ttttattatg
2761 atgtaatacc agtagaatat ttaaaaggca caccacatct gaataatcaa tgtaaatatt
2821 ttctttcaaa gttgtaagtt ttcatatcat gtgctgtaaa gttttcctaa atgaggcttt
2881 aacgtaaaca ctggtgacat aaaccattca ttgctacgtt gcttattgtg tttttatgct
2941 gttttatact tttttatgag ttatgatagc agcaattaag ttgtttgtat tttgcttaac
3001 taaaacaaaa atgcttttat cttgctatag aataaacaca tttcagtaaa aactgtggac
3061 tgtattttga tgcaacaaca aagaaactgt tcacttttca aataaaatga tatgtcagat
3121 ttc
//