LOCUS AK299201 1881 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ54751 complete cds, highly similar to Homo
sapiens suppressor of variegation 4-20 homolog 1, transcript
variant 2, mRNA.
ACCESSION AK299201
VERSION AK299201.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1881)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1881
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7007481"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000493825"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 202..1314
/codon_start=1
/note="highly similar to Homo sapiens suppressor of
variegation 4-20 homolog 1, transcript variant 2, mRNA"
/protein_id="BAH12968.1"
/transl_table=1
/translation="MKWLGESKNMVVNGRRNGGKLSNDHQQNQSKLQHTGKDTLKAGK
NAVERRSNRCNGNSGFEGQSRYVPSSGMSAKELCENDDLATSLVLDPYLGFQTHTMNT
RFRPIKGRQEELKEVIERFKKDEHLEKAFKCLTSGEWARHYFLNKNKMQEKLFKEHVF
IYLRMFATDSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENM
LLRHGENDFSVMYSTRKNCAQLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDIEP
GEEISCYYGDGFFGENNEFCECYTCERRGTGAFKSRVGLPAPAPVINSKYGLRETDKR
LNRLKKLGDSSKNSDSQSVSSNTDADTTQEKNNASK"
BASE COUNT 586 a 340 c 463 g 492 t
ORIGIN
1 gcagcggggc gatgaggtga ggacgcccgg gaaccggagg cggcaccgcg cggcgcacgg
61 acctggtacg cggagtcctg aagccggcgg acggttttcg tacgggcggc cgtgcgcgag
121 gcgaggagag aacattgaaa gtattctcta agctatttga agagagtgac taaatgcacc
181 tgggtcaggc tgtctgtggg tatgaagtgg ttgggagaat ccaagaacat ggtggtgaat
241 ggcaggagaa atggaggcaa gttgtctaat gaccatcagc agaatcaatc aaaattacag
301 cacacgggga aggacaccct gaaggctggc aaaaatgcag tcgagagaag gtcgaacaga
361 tgtaatggta actcgggatt tgaaggacag agtcgctatg taccatcctc tggaatgtcc
421 gccaaggaac tctgtgaaaa tgatgaccta gcaaccagtt tggttcttga tccctattta
481 ggttttcaaa cacacacaat gaatactaga tttaggccta ttaaaggaag gcaggaagaa
541 ctaaaggaag taattgaacg ttttaagaaa gatgaacact tggagaaagc cttcaaatgt
601 ttgacttcag gcgaatgggc acggcactat tttctcaaca agaataaaat gcaggagaaa
661 ttattcaaag aacatgtatt tatttatttg cgaatgtttg caactgacag tggatttgaa
721 atattgccat gtaatagata ctcatcagaa caaaatggag ccaaaatagt tgcaacaaaa
781 gagtggaaac gaaatgacaa aatagaatta ctggtgggtt gtattgccga actttcagaa
841 attgaggaga acatgctact tagacatgga gaaaacgact tcagtgtcat gtactccaca
901 aggaaaaact gtgctcaact ctggctgggt cctgctgcgt ttataaacca tgattgcaga
961 cctaattgta agtttgtgtc aactggtcga gatacagcat gtgtgaaggc tctaagagac
1021 attgaacctg gagaagaaat ttcttgttat tatggagatg ggttctttgg agaaaataat
1081 gagttctgcg agtgttacac ttgcgaaaga cggggcactg gtgcttttaa atccagagtg
1141 ggactgcctg cgcctgctcc tgttatcaat agcaaatatg gactcagaga aacagataaa
1201 cgtttaaata ggcttaaaaa gttaggtgac agcagcaaaa attcagacag tcaatctgtc
1261 agctctaaca ctgatgcaga taccactcag gaaaaaaaca atgcaagtaa gtaagggaga
1321 tttgataagc atatctttta aaagtatttt cacacaattt gctttataaa gtgtgcttca
1381 gtagttttaa acttttaaat actcagagag actgggactt gtgagctttg gccgcacttc
1441 aaggctctag acgtgatttg agtagaggca cagtctgtat cccatctcta acttcagtgc
1501 cgtcctctag actatttttc ttgaatacct tggtaactgg atatgagttc ttcatcatat
1561 gttccaaggt catcatatgt tttaaacatt ttcaaggtgt tagagactgt gatgatgtcg
1621 ctaagtcctg caagaagaca aaaggactga gtagaattaa attagactct atacattcca
1681 gtgcctagcc agtttgttag aaaagatgat ggacttgggg aattcatagc ttctggcctt
1741 aaggcttcca ccttttcatt gcttgctgac ctttttcaaa acgaactgac tcagttcagc
1801 agaccaccag taccagactc agaattgtga tagaggagca ttttgaacag tgccgtattg
1861 tgacatgctg tattggctac t
//