LOCUS AK299199 3044 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58254 complete cds, highly similar to
Lethal(3)malignant brain tumor-like protein.
ACCESSION AK299199
VERSION AK299199.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3044)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3044
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7007354"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000493823"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 47..2569
/codon_start=1
/note="highly similar to Lethal(3)malignant brain
tumor-like protein"
/protein_id="BAG61241.1"
/transl_table=1
/translation="MHLVAGDSPGSGPHLPATAFIIPASSATLGLPSSALDVSCFPRE
PIHVGAPEQVAGCEPVSATVLPQLSAGPASSSTSTVRLLEWTEAAAPPPGGGLRFRIS
EYKPLNMAGVEQPPSPELRQEGVTEYEDGGAPAGDGEAGPQQAEDHPQNPPEDPNQDP
PEDDSTCQCQACGPHQAAGPDLGSSNDGCPQLFQERSVIVENSSGSTSASELLKPMKK
RKRREYQSPSEEESEPEAMEKQEEGKDPEGQPTASAPESEEWSSSQPATGEKKECWSW
ESYLEEQKAITAPVSLFQDSQAVTHNKNGFKLGMKLEGIDPQHPSMYFILTVAEVCGY
RLRLHFDGYSECHDFWVNANSPDIHPAGWFEKTGHKLQPPKGYKEEEFSWSQYLRSTR
AQAAPKHLFVSQSHSPPPLGFQVGMKLEAVDRMNPSLVCVASVTDVVDSRFLVHFDNW
DDTYDYWCDPSSPYIHPVGWCQKQGKPLTPPQDYPDPDNFCWEKYLEETGASAVPTWA
FKVRPPHSFLVNMKLEAVDRRNPALIRVASVEDVEDHRIKIHFDGWSHGYDFRIDADH
PDIHPAGWCSKTGHPLQPPLGPREPSSASPGGCPPLSYRSLPHTRTSKYSFHHRKCPT
PGCDGSGHVTGKFTAHHCLSGCPLAERNQSRLKAELSDSEASARKKNLSGFSPRKKPR
HHGRIGRPPKYRKIPQEDFQTLTPDVVHQSLFMSALSAHPDRSLSVCWEQHCKLLPGV
AGISASTVAKWTIDEVFGFVQTLTGCEDQARLFKDEARIVRVTHVSGKTLVWTVAQLG
DLVCSDHLQEGKGILETGVHSLLCSLPTHLLAKLSFASDSQY"
BASE COUNT 712 a 878 c 822 g 632 t
ORIGIN
1 gctaggcgct gggcggccac cggctggcca ggcaggggag gtcagcatgc acttggtggc
61 cggagacagc cccggttctg gtcctcacct gcccgcaact gccttcatca ttccagccag
121 ttcggccacc ctcggcctgc ccagcagtgc cctggatgtg tcttgctttc cccgggagcc
181 aatccatgtg ggtgccccgg agcaagtggc cggctgcgaa ccagtttctg ccaccgtcct
241 gccgcagctt agcgccgggc cggccagctc cagcaccagc acagtgcggc ttctggaatg
301 gacagaggcc gcggccccgc ccccaggggg cggcctgcgg ttccggataa gcgagtataa
361 gccgctgaac atggcgggag tggagcagcc cccgagcccc gagctgcggc aggaaggcgt
421 gaccgaatac gaagatggcg gggccccggc gggagatggc gaggcgggcc cccaacaggc
481 ggaggaccac ccccagaatc ctccagaaga tcccaatcag gaccccccag aggatgatag
541 cacctgtcag tgccaggcgt gcgggcctca ccaagccgcg ggtccagatc ttggttcctc
601 taatgatggc tgccctcagc tgttccagga gcggtcagtc atagtggaga actcctcagg
661 ctctaccagc gcttctgagc tcctcaaacc catgaagaag aggaagcgca gggaatacca
721 gagcccatca gaggaggagt cggagccaga ggccatggag aagcaagaag aaggaaagga
781 cccagaggga caacccactg ctagcgcccc agagagtgag gagtggagca gcagccagcc
841 tgcaacaggt gagaagaagg aatgctggtc gtgggagtcc tacctagagg agcagaaggc
901 cattactgct ccagtcagcc tcttccagga ctcccaggca gtcactcaca acaagaatgg
961 cttcaaactg ggcatgaagt tggaaggcat tgaccctcaa cacccgtcca tgtacttcat
1021 cctcaccgtg gctgaggtat gtggctatcg cctacgcctg cactttgatg ggtattctga
1081 gtgccatgac ttctgggtca atgccaactc ccctgacatt caccctgctg gctggttcga
1141 gaagacgggc cacaagctgc agcctcccaa aggttacaag gaggaggagt tcagctggag
1201 ccagtatctg cgcagcacaa gagctcaggc tgcccccaag cacctgtttg tgagccagag
1261 ccacagtccc ccacccctgg gcttccaggt gggcatgaag ctggaggctg ttgaccgcat
1321 gaacccgtcc cttgtctgcg tggccagtgt gaccgatgtg gtggacagcc gcttcctggt
1381 gcactttgac aactgggatg atacttatga ctactggtgt gatcccagca gcccctacat
1441 ccacccagtg ggctggtgcc agaagcaagg aaagcccctc acccctccac aagactaccc
1501 agaccctgat aacttctgtt gggagaaata tctggaagaa actggggcct ctgctgtccc
1561 cacctgggcc ttcaaggtgc gaccccctca cagcttcctg gtcaatatga agctggaggc
1621 tgtggaccgc aggaacccag ccctgattcg cgtggccagc gtggaggatg tggaggacca
1681 tcggataaag atccactttg atggctggag tcatggctat gatttccgga tcgacgctga
1741 ccacccagac atccaccctg ccggctggtg ctccaagaca ggacatcccc tgcagcctcc
1801 tctcggaccc agagagccca gctctgcctc ccctgggggc tgtccccctc tcagctatag
1861 gagcctgccc cacactagga cctccaaata cagctttcac caccggaagt gccccactcc
1921 tggttgcgac ggctctggcc atgtcacagg caagttcaca gctcaccatt gcctctcagg
1981 ctgcccactg gctgagagga accagagccg gttgaaagcg gagctgtctg actcggaggc
2041 ctcagcccgc aagaagaacc tctcaggctt ctccccaagg aagaagcctc gccatcacgg
2101 ccgaattgga cgccctccga agtatcgaaa gattccgcag gaagatttcc agaccctcac
2161 gcccgatgtc gtgcaccagt ccctcttcat gtcagccctg tcggcccacc ctgaccgctc
2221 actctcagtg tgctgggagc agcactgcaa gctcctgcca ggagtagcgg gcatctcagc
2281 ctcgacagtc gccaagtgga ccatcgatga ggtcttcggc tttgttcaga ccctgacagg
2341 ttgtgaggac caagcacgcc tcttcaaaga cgaggcaaga atagtcagag tgacccatgt
2401 atctgggaag actctagtct ggactgtggc ccagcttggg gaccttgtgt gctcagatca
2461 tcttcaggaa ggaaaaggca tcctggagac aggagtccat tcactcctct gctctctacc
2521 cactcatttg cttgccaaac ttagctttgc cagtgatagt caatattaaa gtgtactttt
2581 ttccccttta atccaatata gttgataatt aaagtgtatt ttgaatgaca cagatattgt
2641 gatttactgc aaggatccta acacacactt aaaatcaaga gccaaggagt agtgagttgt
2701 agataaaaaa agaatgtcag ctttggagac agtctgggtt taaatcccag ttctgtcaat
2761 ttgagctgtt tactgtctct gagcctacat cttcttgtct gtaaaatgga gataaaatgg
2821 gtttaatgag gtctaccttg cagagccatt gtgagcattg gaaatgatga atgaatcata
2881 ccagaacgtc tagtataatt acagtcatgc attgcttaac gatggggata cattcttaga
2941 aatgtgtcac taggcaattc tgtcattgtg taaacattat agaatgtact tacacaaacc
3001 tagatgttat atgtattttt atttacatgt atattttcac atga
//