LOCUS AK299169 2745 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ58684 complete cds, highly similar to
Transcription factor 4.
ACCESSION AK299169
VERSION AK299169.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2745)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2745
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP3003777"
/clone_lib="NT2RP3"
/db_xref="H-InvDB:HIT000493793"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 519..2462
/codon_start=1
/note="highly similar to Transcription factor 4"
/protein_id="BAH12962.1"
/transl_table=1
/translation="MFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWGNGGHPSPS
RNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQSKTERGSYSSYGRESNLQGCHQQSL
LGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQTKKVRKVPPGLPSSV
YAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGML
GNSSHIPQSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPA
NGTDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAG
TAVWSRNGGQASSSPNYEGPLHSLQSRIEDRLERLDDAIHVLRNHAVGPSTAMPGGHG
DMHGIIGPSHNGAMGGLGSGYGTGLLSANRHSLMVGTHREDGVALRGSHSLLPNQVPV
PQLPVQSATSPDLNPPQDPYRGMPPGLQGQSVSSGSSEIKSDDEGDENLQDTKSSEDK
KLDDDKKDIKSITRSRSSNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKE
LGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSE
PPPLSLAGPHPGMGDASNHMGQM"
BASE COUNT 785 a 668 c 631 g 661 t
ORIGIN
1 cttctcttta taagcccgca gttcccggat gtgaatggat tacaatgtat ctttcaggga
61 aacctattat tatcaatgtg actccacggg ggagtccatg gtgatgatga tgaggaggag
121 gatgatgatg atgagacacc tctaaacttg gaacaagttt aagactttat gagagaagaa
181 aaaaaatcac caacaagaat tgtttgagga aaaattataa ctatcctgtg ttcatttttt
241 tttttataaa caataagaaa aagttgttgg attttttttt aatgatttct tttttggggg
301 agggaatttt gttgcagttt tatggtggaa aatgcaaaaa ccagagccag gtgcataatc
361 ttgtaatctg tggatatccc tggagcagga ctgagtacca gttaaaatac tttttgggga
421 tacacatgtg agatactaag tacttgcaga agatttttgt ctctcttttt aaagtctctt
481 tccttggaat attgtgagaa tatttgtggc catttaagat gttttcacct cctgtgagca
541 gtgggaaaaa tggaccaact tctttggcaa gtggacattt tactggctca aatgtagaag
601 acagaagtag ctcagggtcc tgggggaatg gaggacatcc aagcccgtcc aggaactatg
661 gagatgggac tccctatgac cacatgacca gcagggacct tgggtcacat gacaatctct
721 ctccaccttt tgtcaattcc agaatacaaa gtaaaacaga aaggggctca tactcatctt
781 atgggagaga atcaaactta cagggttgcc accagcagag tctccttgga ggtgacatgg
841 atatgggcaa cccaggaacc ctttcgccca ccaaacctgg ttcccagtac tatcagtatt
901 ctagcaataa tccccgaagg aggcctcttc acagtagtgc catggaggta cagacaaaga
961 aagttcgaaa agttcctcca ggtttgccat cttcagtcta tgctccatca gcaagcactg
1021 ccgactacaa tagggactcg ccaggctatc cttcctccaa accagcaacc agcactttcc
1081 ctagctcctt cttcatgcaa gatggccatc acagcagtga cccttggagc tcctccagtg
1141 ggatgaatca gcctggctat gcaggaatgt tgggcaactc ttctcatatt ccacagtcca
1201 gcagctactg tagcctgcat ccacatgaac gtttgagcta tccatcacac tcctcagcag
1261 acatcaattc cagtcttcct ccgatgtcca ctttccatcg tagtggtaca aaccattaca
1321 gcacctcttc ctgtacgcct cctgccaacg ggacagacag tataatggca aatagaggaa
1381 gcggggcagc cggcagctcc cagactggag atgctctggg gaaagcactt gcttcgatct
1441 attctccaga tcacactaac aacagctttt catcaaaccc ttcaactcct gttggctctc
1501 ctccatctct ctcagcaggc acagctgttt ggtctagaaa tggaggacag gcctcatcgt
1561 ctcctaatta tgaaggaccc ttacactctt tgcaaagccg aattgaagat cgtttagaaa
1621 gactggatga tgctattcat gttctccgga accatgcagt gggcccatcc acagctatgc
1681 ctggtggtca tggggacatg catggaatca ttggaccttc tcataatgga gccatgggtg
1741 gtctgggctc agggtatgga accggccttc tttcagccaa cagacattca ctcatggtgg
1801 ggacccatcg tgaagatggc gtggccctga gaggcagcca ttctcttctg ccaaaccagg
1861 ttccggttcc acagcttcct gtccagtctg cgacttcccc tgacctgaac ccaccccagg
1921 acccttacag aggcatgcca ccaggactac aggggcagag tgtctcctct ggcagctctg
1981 agatcaaatc cgatgacgag ggtgatgaga acctgcaaga cacgaaatct tcggaggaca
2041 agaaattaga tgacgacaag aaggatatca aatcaattac taggtcaaga tctagcaata
2101 atgacgatga ggacctgaca ccagagcaga aggcagagcg tgagaaggag cggaggatgg
2161 ccaacaatgc ccgagagcgt ctgcgggtcc gtgacatcaa cgaggctttc aaagagctcg
2221 gccgcatggt gcagctccac ctcaagagtg acaagcccca gaccaagctc ctgatcctcc
2281 accaggcggt ggccgtcatc ctcagtctgg agcagcaagt ccgagaaagg aatctgaatc
2341 cgaaagctgc gtgtctgaaa agaagggagg aagagaaggt gtcctcagag cctccccctc
2401 tctccttggc cggcccacac cctggaatgg gagacgcatc gaatcacatg ggacagatgt
2461 aaaagggtcc aagttgccac attgcttcat taaaacaaga gaccacttcc ttaacagctg
2521 tattatctta aacccacata aacacttctc cttaaccccc atttttgtaa tataagacaa
2581 gtctgagtag ttatgaatcg cagacgcaag aggtctcagc attcccaatt atcaaaaaac
2641 agaaaaacaa aaaaaagaaa gaaaaaagtg caacttgagg gacgactttc tttaacatat
2701 cattcagaat gtgcaaagca gtatgtacag gctgagacac agccc
//