LOCUS AK299160 1366 bp mRNA linear HUM 31-JUL-2008 DEFINITION Homo sapiens cDNA FLJ60332 complete cds, moderately similar to SH3 and cysteine-rich domain-containing protein. ACCESSION AK299160 VERSION AK299160.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1366) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1366 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RP3001226" /clone_lib="NT2RP3" /db_xref="H-InvDB:HIT000493784" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells after 2-weeks retinoic acid (RA) induction." /organism="Homo sapiens" CDS 142..1167 /codon_start=1 /note="moderately similar to SH3 and cysteine-rich domain-containing protein" /protein_id="BAG61208.1" /transl_table=1 /translation="MIPPSSPREDGVDGLPKEAVGAEQPPSPASTSSQESKLQKLKRS LSFKTKSLRSKSADNFFQRTNSEDMKLQAHMVAEISPSSSPLPAPGSLTSTPARAGLH PGGKAHAFQEYIFKKPTFCDVCNHMIVACGNKVDPVYETLRFGTSPAQRTKKGSSGSG SDSPHRTSTSDLVEVPEEANGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINHQGS LSKDPLQMNTYVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPAN FVQRLQQNEKIFRCVRTFIGCKEQGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIP LDVLENI" BASE COUNT 378 a 379 c 353 g 256 t ORIGIN 1 aggagggcac gtcggcgcct cggcgaggat gggagtcccc aggacccgga gctgagcagc 61 ctggcgcgcg gcgggcaggg cgcgcaggac agaagcctcg ctgttcctcc gggagcccaa 121 caccgttccc gcgcggccac gatgatccct ccgagcagcc cccgcgagga cggcgtggac 181 gggctgccca aggaggcggt gggcgccgag caaccgccct ctcctgcatc caccagcagc 241 caggaatcca agctccagaa actaaaacga tcactttctt tcaagaccaa gagtttacgg 301 agcaaaagtg ctgacaactt cttccagcga accaacagcg aagacatgaa actgcaagca 361 cacatggtgg ctgagatcag ccccagctcc agcccactcc ctgctccagg aagcctgacg 421 tccacacccg ccagggctgg tctgcatcca ggtggcaagg ctcatgcctt tcaggaatac 481 atcttcaaga agcccacttt ctgtgatgtc tgcaaccaca tgatagtggc ctgtggcaat 541 aaggtggacc ctgtctacga gaccctccgc ttcggcacct ccccggccca gaggacaaag 601 aagggcagct ccggcagtgg ctctgactca cctcacagaa cctctacttc agatcttgtg 661 gaggttcctg aggaagccaa tgggccagga ggcgggtatg acctaaggaa acgcagcaac 721 agcgtgttta catatccaga aaatggcact gatgatttca gagatccagc gaagaacata 781 aaccaccagg gatctctttc caaagaccca ttacagatga acacctatgt tgccttgtac 841 aaatttgtac cacaggagaa tgaagatttg gaaatgaggc caggagacat aattactctt 901 ttagaggatt ccaatgaaga ctggtggaaa gggaaaattc aagacagaat tggcttcttt 961 ccagccaact ttgttcagag actacaacaa aatgagaaga tttttagatg tgttagaacc 1021 ttcattgggt gtaaggaaca ggggcagata acactgaaag agaatcagat ctgcgtgagt 1081 tctgaagaag aacaagatgg ttttatcaga gtcctcagtg gaaaaaagaa aggcctcatc 1141 ccccttgatg tactagaaaa catctgattg ctggctcctc ctccgtttgc agtaggcaag 1201 ctctgctgcg atgcctctgc ctcatctcac actgcgtcaa cccaaaggag ctgccgcact 1261 gacccagccc cccaggaaac agtgagacaa gaatcaagta tctgagactg tggagtaata 1321 gccacaaaac agagggccca ctgcacagca tatccaggct gccaca //