LOCUS AK299158 1268 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ50174 complete cds, highly similar to Homo sapiens SNARE protein Ykt6 (YKT6), mRNA. ACCESSION AK299158 VERSION AK299158.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1268) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1268 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RP3000647" /clone_lib="NT2RP3" /db_xref="H-InvDB:HIT000493782" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells after 2-weeks retinoic acid (RA) induction." /organism="Homo sapiens" CDS 169..663 /codon_start=1 /note="highly similar to Homo sapiens SNARE protein Ykt6 (YKT6), mRNA" /protein_id="BAG61206.1" /transl_table=1 /translation="MKLYSLSVLYKGEAKVVLLKAAYDVSSFSFFQRSSVQEFMTFTS QLIVERSSKGTRASVKEQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFS KQVDRIDWPVGSPATIHYPALDGHLSRYQNPREADPMTKVQAELDETKIILARKQNSC CAIM" BASE COUNT 296 a 308 c 385 g 279 t ORIGIN 1 atccggaagt ggattgcgag ccaggaggag gaagccggcg gtggccccgt cagcagccgg 61 ctgctgagag gccggtaggc ggcggcggtc ccgaggggcg gcggccgcgc tgctccctga 121 gaacgggtcc cgcagctggg caggcgggcg gcctgagggc gcggagccat gaagctgtac 181 agcctcagcg tcctctacaa aggcgaggcc aaggtggtgc tgctcaaagc cgcatacgat 241 gtgtcttcct tcagcttttt ccagagatcc agcgttcagg aattcatgac cttcacgagt 301 caactgattg tggagcgctc atcgaaaggc actagagctt ctgtcaaaga acaagactat 361 ctgtgccacg tctacgtccg gaatgatagt cttgcaggtg tggtcattgc tgacaatgaa 421 tacccatccc gggtggcctt taccttgctg gagaaggtac tagatgaatt ctccaagcaa 481 gtcgacagga tagactggcc agtaggatcc cctgctacaa tccattaccc agccctggat 541 ggtcacctca gtagatacca gaacccacga gaagctgatc ccatgactaa agtgcaggcc 601 gaactagatg agaccaaaat cattctggcc cggaaacaaa actcatgctg tgccatcatg 661 tgatgcagcc tgccagaggc ccaatgctgg aatggcacca tcattcacat cagaactgca 721 gcccctggaa aggaagagac agccatagac gaggagccag agtgggggca gactggccat 781 ttttattttg aagttcctgc gagaaatgga tggtggaagg gtggcgaatg ttcaaattca 841 tatgtgtggt agtgattctt ggaaagaatt tgaggtcccc aaaggtgtat ttttgggcaa 901 atgaaaccat aaactccgac tggcttctgt agatgccaaa gggctctttt tcagctaacc 961 ctgggaaggc tctgggaggg aggtcggagc cagctgtttc tcgatctttg gtatatcttt 1021 ggatcttatt tgtacattaa tgatattaac actccagtgg ggggtgggga gtccctgatg 1081 ctagggctgg ggtgggtgga gtttgaagac tcttgggaaa gcctctcctg gggccactgt 1141 tgggggtggg agtgagccca ccacagaggc cacaggcagg cccccacttc aggcccaagg 1201 cctggggcgg ggggaacagt cactgggtct cagattctga gactgttgtt tagcttacct 1261 ttctgcta //