LOCUS AK299149 2242 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ61342 complete cds, highly similar to Homo sapiens Ral GEF with PH domain and SH3 binding motif 1 (RALGPS1), mRNA. ACCESSION AK299149 VERSION AK299149.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2242) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2242 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RP2003460" /clone_lib="NT2RP2" /db_xref="H-InvDB:HIT000493773" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells after 2-weeks retinoic acid (RA) induction." /organism="Homo sapiens" CDS 246..1859 /codon_start=1 /note="highly similar to Homo sapiens Ral GEF with PH domain and SH3 binding motif 1 (RALGPS1), mRNA" /protein_id="BAG61198.1" /transl_table=1 /translation="MYKRNGLMASVLVTSATPQGSSSSDSLEGQSCDYASKSYDAVVF DVLKVTPEEFASQITLMDIPVFKAIQPEELASCGWSKKEKHSLAPNVVAFTRRFNQVS FWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTW ALLNRKDKTTFEKLDYLMSKEDNYKRTRGYIRSLKMVPSIPYLGIYLLDLIYIDSAYP ASGSIMENEQRSNQMNNILRIIADLQVSCSYDRLTTLPHVQKYLKSVRYIEELQKFVE DDNYKLSLRIEPGSSSPRLVSSKEDLAGPSAGSGSARFSRRPTCPDTSVAGSLPTPPV PRHRKSHSLGNNRGRLYATLGPNWRVPVRNSPRTRSCVYSPTGPCICSLGNSAAVPTM EGPLRRKTLLKEGRKPALSSWTRYWVILSGSTLLYYGAKSLRGTDRKHYKSTPGKKVS IVGWMVQLPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNRPQEA GAAPGPTGTDSHEVDHLEGGAGKEAGPCA" BASE COUNT 570 a 599 c 582 g 491 t ORIGIN 1 gcgtctgccc gcgctccagc tgcgcctggc ccggccccgg cccggctcgg cgtggccccg 61 gcctccaagc gaaggcgccg ctgccgctgg gccgctccca gggccatgag gaagcggcgg 121 cagccactgc ggcccgcgtc aaggtgaccg gccgggactg cggcggcggg gagagcggcg 181 gacttctcca gacaggttat gttacctgca gaggctgccc tgaagctccc tgtggcctgg 241 agactatgta caagaggaat ggtctgatgg ctagcgtgtt ggtcacctct gccactccac 301 agggcagcag cagctcggac tctctggagg gccagagctg cgactatgcc agcaagagct 361 atgatgccgt tgtcttcgat gtcttgaaag tgaccccaga ggagtttgct agccagatta 421 cattaatgga tatacctgtg tttaaagcta tccagccgga ggaactagcc agctgtggat 481 ggagtaagaa ggagaaacac agtcttgccc ctaacgttgt ggcctttacc cggaggttta 541 accaggtcag tttttgggtt gtacgagaaa ttctaacagc acagacttta aaaataaggg 601 cagaaatcct cagccatttt gtgaaaatag ccaagaaact tctagaactc aacaaccttc 661 attctctcat gtctgtggta tcagcattac aaagtgctcc catcttcagg ctgacaaaaa 721 cctgggctct tttaaatcga aaagacaaga ctacctttga gaaattggac tacctgatgt 781 cgaaagaaga taattacaag cggacacggg gatatatccg aagcctgaag atggttccaa 841 gtattcccta tctaggaatc tatcttctgg atttaatcta cattgattct gcatatcctg 901 cctcaggcag tatcatggaa aatgaacaaa gatccaatca gatgaacaat attcttcgaa 961 taattgctga tttacaagtt tcctgcagct atgatcgcct caccaccctg ccccatgtgc 1021 agaagtacct gaagtccgta cgctacattg aagagctcca gaagtttgtg gaagacgaca 1081 actacaaact gtcgctcaga atcgaaccag gaagcagctc tccaagacta gtctcttcca 1141 aggaagatct tgcaggtccc tctgctggct ccggttctgc gaggttcagc cggaggccca 1201 cctgtcctga cacatctgtt gctggcagcc tccccacacc tccagtcccc agacacagga 1261 agagccacag cctaggcaac aacaggggac gtctctatgc caccctgggg cccaactggc 1321 gggttccagt taggaattct cccagaaccc ggagctgtgt ctacagcccc accggcccgt 1381 gcatctgttc tctggggaac tccgcagctg tgcccaccat ggaggggcct ctgagaagaa 1441 aaaccctgct caaggaaggg cggaagcctg cgctgtcctc gtggaccagg tactgggtca 1501 tactctcagg atccaccctc ctgtactacg gagccaagtc cttgcggggc acagacagaa 1561 aacactataa atccacacct ggcaaaaagg tttccatcgt gggctggatg gtgcagctgc 1621 ccgatgaccc cgagcaccca gatatcttcc agctgaacaa ccctgacaaa ggcaatgttt 1681 acaagtttca gactggttcc cgatttcatg caatactgtg gcacaagcat ttggatgatg 1741 catgtaaaag caacaggcct caggaagccg gagcagctcc aggtccaaca ggaactgaca 1801 gccacgaggt ggaccacctg gagggcggtg cggggaagga ggcagggccc tgtgcctgaa 1861 gcctgggcac catggtggcc ccagtcagga gcaacagtgg tagccctgag taaaacccat 1921 tgtccctctt tggaggagcg gccagaggat gacagcagcc ccagcaggca gcagtgcctg 1981 ggcaggctga tccagcagag cactaatggg tcagtttcat gtattggcag atgtggtgta 2041 gcatggcaag gctacaagtt ttaaggattt ttgtctgatt ttcagacctg gaggagggga 2101 tttttcttcc tactttcccc cttttttatt tctaatttac tttcaaccaa atattcccac 2161 tatgtgctat atgtaataat aaaaagttga caacaactga aatattcaac agcagaggat 2221 gatttaagtg aatcacagta ca //