LOCUS AK299139 1465 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ50173 complete cds, highly similar to Plakophilin-2. ACCESSION AK299139 VERSION AK299139.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1465) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1465 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RM4001430" /clone_lib="NT2RM4" /db_xref="H-InvDB:HIT000493763" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from uninduced NT2 neuronal precursor cells." /organism="Homo sapiens" CDS 213..1304 /codon_start=1 /note="highly similar to Plakophilin-2" /protein_id="BAG61191.1" /transl_table=1 /translation="MITEALLTLTENIIIPFSVWPEGDYPKANGLLDFDIFYNVTGCL RNMSSAGSDGRKAMRRCDGLIDSLVHYVRGTIADYQPDDKATENCVCILHNLSYQLEA ELPEKYSQNIYIQNRNIQTDNNKSIGCFGSRSRKVKEQYQDVPMPEEKSNPKGVEWLW HSIVIRMYLSLIAKSVRNYTQEASLGALQNLTAGSGPMPTSVAQTVVQKESGLQHTRK MLHVGDPSVKKTAISLLRNLSRNLSLQNEIAKETLPDLVSIIPDTVPSTDLLIETTAS ACYTLNNIIQNSYQNARDLLNTGGIQKIMAISAGDAYASNKASKAASVLLYSLWAHTE LHHAYKKAQFKKTDFVNSRTAKAYHSLKD" BASE COUNT 456 a 347 c 324 g 338 t ORIGIN 1 taaaagttca gaatgaagac gttcagcgag ctgtgtgtgg ggccttgaga aacttagtat 61 ttgaagacaa tgacaacaaa ttggaggtgg ctgaactaaa tggggtacct cggctgctcc 121 aggtgctgaa gcaaaccaga gacttggaga ctaaaaaaca aataacaggt ttgctgtgga 181 atttgtcatc taatgacaaa ctcaagaatc tcatgataac agaagcattg cttacgctga 241 cggagaatat catcatcccc ttttctgtgt ggcctgaagg agactaccca aaagcaaatg 301 gtttgctcga ttttgacata ttctacaacg tcactggatg cctaagaaac atgagttctg 361 ctggctctga tgggagaaaa gcgatgagaa gatgtgacgg actcattgac tcactggtcc 421 attatgtcag aggaaccatt gcagattacc agccagatga caaggccacg gagaattgtg 481 tgtgcattct tcataacctc tcctaccagc tggaggcaga gctcccagag aaatattccc 541 agaatatcta tattcaaaac cggaatatcc agactgacaa caacaaaagt attggatgtt 601 ttggcagtcg aagcaggaaa gtaaaagagc aataccagga cgtgccgatg ccggaggaaa 661 agagcaaccc caagggcgtg gagtggctgt ggcattccat tgttataagg atgtatctgt 721 ccttgatcgc caaaagtgtc cgcaactaca cacaagaagc atccttagga gctctgcaga 781 acctcacggc cggaagtgga ccaatgccga catcagtggc tcagacagtt gtccagaagg 841 aaagtggcct gcagcacacc cgaaagatgc tgcatgttgg tgacccaagt gtgaaaaaga 901 cagccatctc gctgctgagg aatctgtccc ggaatctttc tctgcagaat gaaattgcca 961 aagaaactct ccctgatttg gtttccatca ttcctgacac agtcccgagt actgaccttc 1021 tcattgaaac tacagcctct gcctgttaca cattgaacaa cataatccaa aacagttacc 1081 agaatgcacg cgaccttcta aacaccgggg gcatccagaa aattatggcc attagtgcag 1141 gcgatgccta tgcctccaac aaagcaagta aagctgcttc cgtccttctg tattctctgt 1201 gggcacacac ggaactgcat catgcctaca agaaggctca gtttaagaag acagattttg 1261 tcaacagccg gactgccaaa gcctaccact cccttaaaga ctgaggaaaa tgacaaagta 1321 ttctcggctg caaaaatccc caaaggaaaa cacctatttt tctactaccc agcccaagaa 1381 acctcaaaag catgccttgt ttctatcctt ctctatttcc gtggtcccct gaatccagaa 1441 aacaaataga acataatttt atgag //