LOCUS AK299128 1341 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ51724 complete cds, highly similar to Neuronal PAS domain-containing protein 1. ACCESSION AK299128 VERSION AK299128.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1341) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1341 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RM2003222" /clone_lib="NT2RM2" /db_xref="H-InvDB:HIT000493752" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from uninduced NT2 neuronal precursor cells." /organism="Homo sapiens" CDS 37..741 /codon_start=1 /note="highly similar to Neuronal PAS domain-containing protein 1" /protein_id="BAG61181.1" /transl_table=1 /translation="MTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSS SSLADTPEIEASLTKVPPSSLVQERSFFVRMKSTLTKRGLHVKASGYKVIHVTGRLRA HALGLVALGHTLPPAPLAELPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGR SCYQFVHGQDATRIRQSHVDSCRGLRVAAVCGHSGWEREEPRGAPCALGQPRAQPSRG WPNSFGCLPASSQRGL" BASE COUNT 220 a 490 c 428 g 203 t ORIGIN 1 aatgggagtc atggcagcca tggtggtcag gtggagatga cgggcagcag cgtcttcgac 61 tacattcacc ctggggacca ctcagaggtg ctggagcaac tggggctgcg gacgccgacg 121 cccggccccc caaccccgcc ctccgtctcc tcttcctcct cctcttcctc ttcgcttgca 181 gatacccccg agatcgaggc cagcctcacc aaggtgcccc cctcctccct ggtccaggag 241 cgctccttct ttgtccgcat gaaatccacg ctcaccaaga gggggctgca cgtcaaggcc 301 tcagggtaca aggtcatcca cgtgactggg cgccttcggg cccacgccct gggccttgtg 361 gccctcgggc acacgttgcc cccggccccc ctggctgagc tgccactcca tggacacatg 421 atcgtcttcc gtctcagcct gggtctcacc atccttgctt gtgagagcag agtcagcgac 481 cacatggacc tggggccctc agagctggtg ggccgcagct gctaccagtt tgtccacgga 541 caagacgcca cgaggatccg ccagagccac gtggactcgt gccgggggct tcgtgtggct 601 gcagtctgtg gccacagtgg ctgggagcgg gaagagcccc ggggagcacc atgtgctttg 661 ggtcagccac gtgctcagcc aagccgaggg tggccaaact cctttggatg ccttccagct 721 tccagccagc gtggcctgtg aggaggcatc cagcccgggg ccagagccca cagagccgga 781 gcctccgacg gaagggaagc aggctgcccc agcggagaac gaggcccccc agacccaggg 841 caaacgcatc aaagtggagc ccggcccgag ggaaaccaaa ggctccgagg acagtggcga 901 cgaggatccc tccagccacc cggccacacc gaggcccgag ttcacctctg tcatccgggc 961 aggggtcctg aagcaggatc cggtgcggcc atggggcctg gcacctcccg gggacccccc 1021 gcccaccctc ctgcacgcgg gcttcctgcc gccggtggtg cggggcctgt gcacacccgg 1081 caccatccgc tacggccccg cggagctggg cctggtgtac ccgcacctgc agaggctggg 1141 tccgggcccc gcgctcccgg aggcctttta cccgcccctg ggcctgccct acccggggcc 1201 cgcgggcacc aggctgccgc ggaaggggga ctgaggactg gcagagctgc cggcgccgga 1261 ccctgcgaca accggggtcc cccaggacag taggcccggc tctgcccgta gccctgagaa 1321 ttaaacgccg gctctccctg c //