LOCUS AK299107 3038 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ54723 complete cds, highly similar to Poly (ADP-ribose) polymerase 9 (EC 2.4.2.30). ACCESSION AK299107 VERSION AK299107.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3038) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3038 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RI3008069" /clone_lib="NT2RI3" /db_xref="H-InvDB:HIT000493731" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells treated 2-weeks mitotic inhibitor after 5-weeks retinoic acid (RA) induction." /note="majorly NT2 neuron" /organism="Homo sapiens" CDS 346..2679 /codon_start=1 /note="highly similar to Poly (ADP-ribose) polymerase 9 (EC 2.4.2.30)" /protein_id="BAH12952.1" /transl_table=1 /translation="MGVSCVKSSRISLAVSLPWSLQFRKATANLCMFRKMLTPRIELS VWKDDLTTHAVDAVVNAANEDLLHGGGLALALVKAGGFEIQEESKQFVARYGKVSAGE IAVTGAGRLPCKQIIHAVGPRWMEWDKQGCTGKLQRAIVSILNYVIYKNTHIKTVAIP ALSSGIFQFPLNLCTKTIVETIRVSLQGKPMMSNLKEIHLVSNEDPTVAAFKAASEFI LGKSELGQETTPSFNAMVVNNLTLQIVQGHIEWQTADVIVNSVNPHDITVGPVAKSIL QQAGVEMKSEFLATKAKQFQRSQLVLVTKGFNLFCKYIYHVLWHSEFPKPQILKHAMK ECLEKCIEQNITSISFPALGTGNMEIKKETAAEILFDEVLTFAKDHVKHQLTVKFVIF PTDLEIYKAFSSEMAKRSKMLSLNNYSVPQSTREEKREDGLEARSPAINLMGFNVEEM YEAHAWIQRILSLQNHHIIENNHILYLGRKEHDILSQLQKTSSVSITEIISPGRTELE IEGARADLIEVVMNIEDMLCKVQEEMARKKERGLWRSLGQWTIQQQKTQDEMKENIIF LKCPVPPTQELLDQKKQFEKCGLQVLKVEKIDNEVLMAAFQRKKKMMEEKLHRQPVSH RLFQQVPYQFCNVVCRVGFQRMYSTPCDPKYGAGIYFTKNLKNLAEKAKKISAADKLI YVFEAEVLTGFFCQGHPLNIVPPPLSPGAIDGHDSVVDNVSSPETFVIFSGMQAIPQY LWTCTQEYVQSQDYSSGPMRPFAQHPWRGFASGSPVD" BASE COUNT 921 a 607 c 724 g 786 t ORIGIN 1 gagtaggtcc ggtgcctctg ggccctcggg gtcccctctc ctgcaggctc gaggtgggcg 61 gggagaaggg ggacgggcgc ggacccgggt cccagggcca ggcctccctt gtgagtagac 121 tatgcaaaga aaaagtgggc caccatatct ggaaactaca gtctatgctt tgaagcgcaa 181 aagggaataa acatttaaag actcccccgg ggacctggag gatggacttt tccatggtgg 241 ctggagcagc agcttacaat gaaaaatcag agactggtgc tcttggagaa aactatagtt 301 ggcaaattcc cattaaccac aatgacttca aaattttaaa aaataatggg cgtcagctgt 361 gtgaagtcct ccagaataag tttggctgta tctctaccct ggtctctcca gttcaggaag 421 gcaacagcaa atctctgcat gttcagaaaa atgctgactc ctaggataga gttatcagtc 481 tggaaagatg acctcaccac acatgctgtt gatgctgtgg tgaatgcagc caatgaagat 541 cttctgcatg ggggaggcct ggccctggcc ctggtaaaag ctggtggatt tgaaatccaa 601 gaagagagca aacagtttgt tgccagatat ggtaaagtgt cagctggtga gatagctgtc 661 acgggagcag ggaggcttcc ctgcaaacag atcatccatg ctgttgggcc tcggtggatg 721 gaatgggata aacagggatg tactggaaag ctgcagaggg ccattgtaag tattctgaat 781 tatgtcatct ataaaaatac tcacattaag acagtagcaa ttccagcctt gagctctggg 841 atttttcagt tccctctgaa tttgtgtaca aagactattg tagagactat ccgggttagt 901 ttgcaaggga agccaatgat gagtaatttg aaagaaattc acctggtgag caatgaggac 961 cctactgttg ctgcctttaa agctgcttca gaattcatcc tagggaagag tgagctggga 1021 caagaaacca ccccttcttt caatgcaatg gtcgtgaaca acctgaccct ccagattgtc 1081 cagggccaca ttgaatggca gacggcagat gtaattgtta attctgtaaa cccacatgat 1141 attacagttg gacctgtggc aaagtcaatt ctacaacaag caggagttga aatgaaatcg 1201 gaatttcttg ccacaaaggc taaacagttt caacggtccc agttggtact ggtcacaaaa 1261 ggatttaact tgttctgtaa atatatatac catgtactgt ggcattcaga atttcctaaa 1321 cctcagatat taaaacatgc aatgaaggag tgtttggaaa aatgcattga gcaaaatata 1381 acttccattt cctttcctgc ccttgggact ggaaacatgg aaataaagaa ggaaacagca 1441 gcagagattt tgtttgatga agttttaaca tttgccaaag accatgtaaa acaccagtta 1501 actgtaaaat ttgtgatctt tccaacagat ttggagatat ataaggcttt cagttctgaa 1561 atggcaaaga ggtccaagat gctgagtttg aacaattaca gtgtccccca gtcaaccaga 1621 gaggagaaaa gagaagatgg gcttgaagct agatctcctg ccatcaatct gatgggattc 1681 aacgtggaag agatgtatga ggcccacgca tggatccaaa gaatcctgag tctccagaac 1741 caccacatca ttgagaataa tcatattctg taccttggga gaaaggaaca tgacattttg 1801 tctcagcttc agaaaacttc aagtgtctcc atcacagaaa ttatcagccc aggaaggaca 1861 gagttagaga ttgaaggagc ccgggctgac ctcattgagg tggttatgaa cattgaagat 1921 atgctttgta aagtacagga ggaaatggca aggaaaaagg agcgaggcct ttggcgctcg 1981 ttaggacagt ggactattca gcaacaaaaa acccaagacg aaatgaaaga aaatatcata 2041 tttctgaaat gtcctgtgcc tccaactcaa gagcttctag atcaaaagaa acagtttgaa 2101 aaatgtggtt tgcaggttct aaaggtggag aagatagaca atgaggtcct tatggctgcc 2161 tttcaaagaa agaagaaaat gatggaagaa aaactgcaca ggcaacctgt gagccatagg 2221 ctgtttcagc aagtcccata ccagttctgc aatgtggtat gcagagttgg ctttcaaaga 2281 atgtactcga caccttgcga tccaaaatac ggagctggca tatacttcac caagaacctc 2341 aaaaacctgg cagagaaggc caagaaaatc tctgctgcag ataagctgat ctatgtgttt 2401 gaggctgaag tactcacagg cttcttctgc cagggacatc cgttaaatat tgttccccca 2461 ccactgagtc ctggagctat agatggtcat gacagtgtgg ttgacaatgt ctccagccct 2521 gaaacctttg ttatttttag tggcatgcag gctatacctc agtatttgtg gacatgcacc 2581 caggaatatg tacagtcaca agattactca tcaggaccaa tgagaccctt tgcacagcat 2641 ccttggaggg gattcgcaag tggcagccct gttgattaat ctctacatca ttttaacagc 2701 tggtatggcc ttaccttggg tgaactaacc aaataatgac catcgatggc tcaaagagtg 2761 gcttgaatat atcccatggg ttatctgtat ggactgactg ggttattgaa aggactagcc 2821 acatactagc atcttagtgc ctttatctgt ctttatgtct tggggttggg gtaggtagat 2881 accaaatgaa acactttcag gaccttcctt cctcttgcag ttgttcttta atctccttta 2941 ctagaggaga taaatatttt gcatataatg aagaaatttt tctagtatat aacgcaggcc 3001 ttttattttc taaaatgatg atagtataaa aatgttag //