LOCUS AK299088 1360 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ54135 complete cds, highly similar to Branched-chain-amino-acid aminotransferase, cytosolic (EC 2.6.1.42). ACCESSION AK299088 VERSION AK299088.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1360) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1360 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RI3006473" /clone_lib="NT2RI3" /db_xref="H-InvDB:HIT000493712" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells treated 2-weeks mitotic inhibitor after 5-weeks retinoic acid (RA) induction." /note="majorly NT2 neuron" /organism="Homo sapiens" CDS 112..1161 /codon_start=1 /note="highly similar to Branched-chain-amino-acid aminotransferase, cytosolic (EC 2.6.1.42)" /protein_id="BAH12946.1" /transl_table=1 /translation="MKDCSNGCSAECTGEGGSKEVVGTFKAKDLIVTPATILKEKPDP NNLVFGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVEVFDKEELLE CIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLFVLLSPVGPYFSSG TFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDNGCQQVLWLYGEDHQI TEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQWGEFKVSERYLTM DDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPKLASRILSKLTD IQYGREESDWTIVLS" BASE COUNT 376 a 284 c 352 g 348 t ORIGIN 1 gcagccggga ccgcgctctg cagccgcaga cccggtccac acggccaggg gctacgaccc 61 ttgggatctg ccctccgctc agctcgagct tccctcgtgg ccgacggaac aatgaaggat 121 tgcagtaacg gatgctccgc agagtgtacc ggagaaggag gatcaaaaga ggtggtgggg 181 acttttaagg ctaaagacct aatagtcaca ccagctacca ttttaaagga aaaaccagac 241 cccaataatc tggtttttgg aactgtgttc acggatcata tgctgacggt ggagtggtcc 301 tcagagtttg gatgggagaa acctcatatc aagcctcttc agaacctgtc attgcaccct 361 ggctcatcag ctttgcacta tgcagtggaa gtatttgaca aagaagagct cttagagtgt 421 attcaacagc ttgtgaaatt ggatcaagaa tgggtcccat attcaacatc tgctagtctg 481 tatattcgtc ctacattcat tggaactgag ccttctcttg gagtcaagaa gcctaccaaa 541 gccctgctct ttgtactctt gagcccagtg ggaccttatt tttcaagtgg aacctttaat 601 ccagtgtccc tgtgggccaa tcccaagtat gtaagagcct ggaaaggtgg aactggggac 661 tgcaagatgg gagggaatta cggctcatct ctttttgccc aatgtgaagc agtagataat 721 gggtgtcagc aggtcctgtg gctctatgga gaggaccatc agatcactga agtgggaact 781 atgaatcttt ttctttactg gataaatgaa gatggagaag aagaactggc aactcctcca 841 ctagatggca tcattcttcc aggagtgaca aggcggtgca ttctggacct ggcacatcag 901 tggggtgaat ttaaggtgtc agagagatac ctcaccatgg atgacttgac aacagccctg 961 gaggggaaca gagtgagaga gatgtttggc tctggtacag cctgtgttgt ttgcccagtt 1021 tctgatatac tgtacaaagg cgagacaata cacattccaa ctatggagaa tggtcctaag 1081 ctggcaagcc gcatcttgag caaattaact gatatccagt atggaagaga agagagcgac 1141 tggacaattg tgctatcctg aacggaaaat agaggataca atggaaaata gaggatacca 1201 actgtatgct actgggacag actgttgcat ttgaattgtg atagatttct ttggctacct 1261 gtgcataatg tagtttgtag tatcaatgtg ttacaagagt gattgtttct tcatgccaga 1321 gaaaatgaat tgcaatcatc aaatggtgtt tcataacttg //