LOCUS       AK299056                2229 bp    mRNA    linear   HUM 24-JUL-2008
DEFINITION  Homo sapiens cDNA FLJ53165 complete cds, weakly similar to Homo
            sapiens thrombospondin repeat containing 1 (TSRC1), transcript
            variant 1, mRNA.
ACCESSION   AK299056
VERSION     AK299056.1
KEYWORDS    FLI_CDNA; oligo capping.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Isogai,T. and Yamamoto,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
            Contact:Takao Isogai
            Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
            Chiyoda-ku, Tokyo 101-0044, Japan
            E-mail :flj-cdna@nifty.com
REFERENCE   2
  AUTHORS   Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
            Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
            Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
            Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
  TITLE     NEDO human cDNA sequencing project focused on splicing variants
  JOURNAL   Unpublished (2007)
COMMENT     Human cDNA sequencing project focused on splicing variants of mRNA
            in NEDO functional analysis of protein and research application
            project supported by Ministry of Economy, Trade and Industry,
            Japan; cDNA selection for complete cds sequencing: Reverse
            Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
            (Hitachi) and Japan Biological Informatics Consortium, Japan
            (JBIC); cDNA complete cds sequencing: JBIC; cDNA library
            construction: Helix Research Institute supported by Japan Key
            Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
            Research Association for Biotechnology, Japan, Biotechnology
            Center, National Institute of Technology and Evaluation, Japan and
            HRI; cDNA mapping to human genome: Central Research Laboratory,
            Hitachi; evaluation and annotation: REPRORI.
FEATURES             Location/Qualifiers
     source          1..2229
                     /cell_line="NT2"
                     /cell_type="teratocarcinoma"
                     /clone="NT2RI3002789"
                     /clone_lib="NT2RI3"
                     /db_xref="H-InvDB:HIT000493680"
                     /db_xref="taxon:9606"
                     /mol_type="mRNA"
                     /note="cloning vector: pME18SFL3"
                     /note="mRNA from NT2 neuronal precursor cells treated
                     2-weeks mitotic inhibitor after 5-weeks retinoic acid
                     (RA) induction."
                     /note="majorly NT2 neuron"
                     /organism="Homo sapiens"
     CDS             209..2185
                     /codon_start=1
                     /note="weakly similar to Homo sapiens thrombospondin
                     repeat containing 1 (TSRC1), transcript variant 1, mRNA"
                     /protein_id="BAG61125.1"
                     /transl_table=1
                     /translation="MFVSYLILTLLHVQTAVLARPGGESIGCDDYLGSDKVVDKCGVC
                     GGDNTGCQVVSGVFKHALTSLGYHRVVEIPEGATKINITEMYKSNNYLALRSRSGRSI
                     INGNWAIDRPGKYEGGGTMFTYKRPNEISSTAGESFLAEGPTNEILDVYMIHQQPNPG
                     VHYEYVIMGTNAISPQVPPHRRPGEPFNGQMVTEGRSQEEGEQKGRNEEKEDLRGEAP
                     EMFTSESAQTFPVRHPDRFSPHRPDNLVPPAPQPPRRSRDHNWKQLGTTECSTTCGKG
                     SQYPIFRCVHRSTHEEAPESYCDSSMKPTPEEEPCNIFPCPAFWDIGEWSECSKTCGL
                     GMQHRQVLCRQVYANRSLTVQPYRCQHLEKPETTSTCQLKICSEWQIRTDWTSCSVPC
                     GVGQRTRDVKCVSNIGDVVDDEECNMKLRPNDIENCDMGPCAKSWFLTEWSERCSAEC
                     GAGVRTRSVVCMTNHVSSLPLEGCGNNRPAEATPCDNGPCTGKVEWFAGSWSQCSIEC
                     GSGTQQREVICVRKNADTFEVLDPSECSFLEKPPSQQSCHLKPCGAKWFSTEWSMCSK
                     SCQGGFRVREVRCLSDDMTLSNLCDPQLKPEERESCNPQDCVPEVDENCKDKYYNCNV
                     VVQARLCVYNYYKTACCASCTRVANRQTGFLGSR"
BASE COUNT          547 a          596 c          670 g          416 t
ORIGIN      
        1 attacatgaa gagatcagct taccagtttt cttcagaaca gaggctgagc tcgaagcgcc
       61 gggcagtaca gtgagggaga gccgagggaa ccagcgcggt gcctagcgga actccagggc
      121 tggaatcccg agacacaagt gcatctgcta gctgttagca cttggcagac ggagttctcc
      181 tctagggtag ttctaacttt gggtaataat gtttgtcagc tacctgatat taacattgct
      241 ccacgttcaa acagcagtgt tagcaagacc tgggggagag agcattggct gtgatgacta
      301 cttaggctcc gacaaagtcg tggacaaatg tggggtgtgt ggaggagaca acacgggctg
      361 tcaggttgtg tcgggcgtgt ttaagcatgc cctcaccagc ctgggctacc accgcgtcgt
      421 ggagattccc gagggagcca cgaaaatcaa catcacggag atgtacaaga gcaacaacta
      481 tttggccctg agaagtcgtt ctggacgctc catcatcaat gggaactggg caattgatcg
      541 accaggaaaa tacgagggcg gagggaccat gttcacctac aagcgtccaa atgagatttc
      601 gagcactgcc ggagagtcct ttttggcgga aggtcccacc aacgagatct tggatgtcta
      661 catgatacac cagcagccaa acccaggcgt gcactacgag tacgtgatca tggggaccaa
      721 cgccatcagc ccccaggtgc caccccacag gagaccaggg gaacccttca atggccagat
      781 ggtgacagaa ggcaggagcc aggaggaggg agaacagaaa gggaggaacg aggagaagga
      841 agacttgcgt ggggaggccc ctgagatgtt cacctcagaa tcggcacaga ccttcccagt
      901 caggcatcca gacagatttt ctccccatcg accggacaac ttggtgccac cagcaccgca
      961 gcccccacgg cgcagccggg atcacaactg gaagcagctt gggacaacag aatgttccac
     1021 gacctgtggg aaaggatcgc agtaccctat tttccgctgt gtgcacagaa gcactcatga
     1081 agaggctcct gagagttact gtgactccag catgaagccg acccccgagg aggagccctg
     1141 caacatcttc ccttgcccag ccttctggga catcggggag tggtctgagt gcagcaagac
     1201 ctgtggcctg ggcatgcagc accgccaggt tctgtgccgc caggtgtacg ccaaccgcag
     1261 cctgacggtg cagccctacc gctgccagca cctggagaaa cctgagacca ccagcacctg
     1321 ccaactcaag atctgcagcg agtggcagat ccggaccgac tggacctcgt gctcggtgcc
     1381 ctgcggcgtg ggacagagga cccgtgatgt gaagtgtgtg agcaacattg gggatgtggt
     1441 tgacgatgag gaatgcaaca tgaagctccg gccgaatgac attgagaact gcgacatggg
     1501 accctgtgcc aagagctggt tcctcaccga gtggagcgaa aggtgctcag cggagtgtgg
     1561 ggccggagtg cggacacgct cggtggtgtg catgaccaac catgtcagca gcctgcccct
     1621 ggagggctgt gggaacaacc ggccggcaga ggccacccca tgtgacaacg gaccctgcac
     1681 gggcaaggtg gagtggtttg ccgggagctg gagtcagtgt tccatcgagt gtgggagcgg
     1741 gacgcaacag agggaggtga tttgtgttag aaagaatgca gacacctttg aagtgttgga
     1801 cccctctgaa tgttctttcc tggagaaacc ccccagccag caatcctgcc acctcaagcc
     1861 ttgcggagcc aaatggttta gcaccgaatg gagcatgtgt tccaagagct gccagggtgg
     1921 ctttcgggtc cgggaagtgc ggtgtctgtc tgatgacatg actctaagta acctctgtga
     1981 ccctcagttg aaaccagaag agagagaatc ttgtaaccct caggactgtg tccctgaagt
     2041 tgatgaaaac tgcaaggaca agtactacaa ctgcaacgtg gtggtccagg caagactctg
     2101 tgtctacaac tactacaaga ccgcctgctg tgcctcctgc acccgtgtgg ccaacaggca
     2161 gacgggcttc ctggggagca gataacactc ctgcaccccc atcagtaggg cagcatcact
     2221 gccttcccg
//