LOCUS AK299052 1575 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ60814 complete cds, highly similar to Probable E3 ubiquitin-protein ligase MGRN1(EC 6.3.2.-). ACCESSION AK299052 VERSION AK299052.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1575) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1575 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RI3002696" /clone_lib="NT2RI3" /db_xref="H-InvDB:HIT000493676" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells treated 2-weeks mitotic inhibitor after 5-weeks retinoic acid (RA) induction." /note="majorly NT2 neuron" /organism="Homo sapiens" CDS 120..1082 /codon_start=1 /note="highly similar to Probable E3 ubiquitin-protein ligase MGRN1(EC 6.3.2.-)" /protein_id="BAG61124.1" /transl_table=1 /translation="MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKF DTPHPEGYLFGENMDLNFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKD DADSPTEDGDKPRVLYSLEFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSET VHYKRGVSQQFSLPSFKIDFSEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAH VLLAAFEKHMDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSN ECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLQL" BASE COUNT 317 a 543 c 444 g 271 t ORIGIN 1 tccgcggccg tggacgagcg tccgtgcggc ctggtccggg ccatgtccgc gtgaggaccc 61 cgccgctgtc gccgctcccg ttccggccct ggcccctctg cccggcagcg cggcgcacca 121 tgggctccat tctcagccgc cgcatcgcgg gggtggagga catcgacatc caggcgaact 181 cggcctatcg ctaccctccg aagtccggaa actactttgc ttcgcacttt ttcatgggag 241 gagagaaatt cgacaccccc caccctgaag gttacctctt tggagagaac atggatctga 301 acttcctggg cagccgcccg gtccagtttc cctacgtcac tcctgccccc cacgagcccg 361 tgaagacgct gcggagcctg gtgaacatcc gcaaagactc cctgcggctg gtgaggtaca 421 aagacgatgc cgacagcccc accgaggacg gcgacaagcc ccgggtgctc tacagcctgg 481 agttcacctt cgacgccgat gcccgcgtgg ccatcaccat ctactgccag gcatcggagg 541 agttcctgaa cggcagggca gtatacagcc ccaagagccc ctcgctacag tccgagaccg 601 tccactacaa gagaggggtg agccagcagt tctccctgcc ctccttcaag attgacttct 661 cggaatggaa ggatgacgag ctgaactttg acctggaccg gggcgtgttt ccagtagtca 721 tccaggctgt ggtggacgaa ggagatgtgg tggaagtgac tggccacgcc cacgtgctct 781 tggctgcctt tgaaaagcac atggacggca gcttctctgt gaagccttta aagcagaagc 841 aaattgtgga ccgggtcagc tacctcctgc aggagatcta tggcattgag aacaagaaca 901 accaggagac caagccctcg gacgacgaga acagcgacaa cagcaacgag tgtgtggtgt 961 gcctgtccga cctgcgggac acgctgatcc tgccctgccg ccacctgtgc ctctgtacct 1021 cctgcgccga cacgctgcgc taccaggcca acaactgccc catctgccgg ctgcaactct 1081 gacagcgtcc cacctggcta cgagcccatc tcgctgctcg aggcgctcaa cggcctccgg 1141 gctgtctccc cggccatccc ctcggcccct ctttatgaag aaatcaccta ttcaggcatc 1201 tcggacggcc tgtcccaggc cagctgtccc ctcgcggcta tcgaccacat cctggacagc 1261 agccgccaga agggcaggcc gcagagcaag gcccccgaca gcaccctacg gtccccgtct 1321 tcccccatcc acgaagagga tgaggagaag ctctccgagg acgtggacgc ccctccccca 1381 ctgggtggcg cagagctggc cctgcgggaa agcagctccc ctgagagttt cataacagaa 1441 gaggttgatg agtcgtcgtc accacagcaa gggacccgag cagcttccat tgagaatgtc 1501 ctgcaggaca gcagccccga gcactgtggc cgaggcccac ctgctgacat ctacctgcca 1561 ggacggccca cctcc //