LOCUS AK299032 4255 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ51634 complete cds, highly similar to Integrator complex subunit 2. ACCESSION AK299032 VERSION AK299032.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4255) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..4255 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RI3000210" /clone_lib="NT2RI3" /db_xref="H-InvDB:HIT000493656" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells treated 2-weeks mitotic inhibitor after 5-weeks retinoic acid (RA) induction." /note="majorly NT2 neuron" /organism="Homo sapiens" CDS 357..3947 /codon_start=1 /note="highly similar to Integrator complex subunit 2" /protein_id="BAG61107.1" /transl_table=1 /translation="MTECTSLQFVSPFAFEAMQKVDVVCLASLSDPELRLLLPCLVRM ALCAPADQSQSWAQDKKLILRLLSGVEAVNSIVALLSVDFHALEQDASKEQQLRHKLG GGSGESILVSQLQHGLTLEFEHSDSPRRLRLVLSELLAIMNKVSESNGEFFFKSSELF ESPVYLEEAADVLCILQAELPSLLPIVDVAEALLHVRNGAWFLCLLVANVPDSFNEVC RGLIKNGERQDEESLGGRRRTDALRFLCKMNPSQALKVRGMVVEECHLPGLGVALTLD HTKNEACEDGVSDLVCFVSGLLLGTNAKVRTWFGTFIRNGQQRKRETSSSVLWQMRRQ LLLELMGILPTVRSTRIVEEADVDMEPNVSVYSGLKEEHVVKASALLRLYCALMGIAG LKPTEEEAEQLLQLMTSRPPATPAGVRFVSLSFCMLQAFSTLVSTPEQEQLMVVWLSW MIKEEAYFESTSGVSASFGEMLLLVAMYFHSNQLSAIIDLVCSTLGMKIVIKPSSLSR MKTIFTQEIFTEQVVTAHAVRVPVTSNLSANITGFLPIHCIYQLLRSRSFTKHKVSIK DWIYRQLCETSTPLHPQLLPLIDVYINSILTPASKSNPEATNQPVTEQEILNIFQGVI GGDNIRLNQRFSITAQLLVLYYILSYEEALLANTKTLAAMQRKPKSYSSSLMDQIPIK FLIRQAQGLQQELGGLHSALLRLLATNYPHLCIVDDWICEEEITGTDALLRRMLLTNN AKNHSPKQLQEAFSAVPVNHTQVMQIIEHLTLLSASELIPYAEVLTSNMSQLLNSGVP RRILQTVNKLWMVLNTVMPRRLWVMTVNALQPSIKFVRQQKYTQNDLMIDPLIVLRCD QRVHRCPPLMDITLHMLNGYLLASKAYLSAHLKETEQDRPSQNNTIGLVGQTDAPEVT REELKNALLAAQDSAAVQILLEICLPTEEEKANGVNPDSLLRNVQSVITTSAPNKGME EGEDNLLCILREVQCLICCLLHQMYIADPNIAKLVHFQGYPCELLPLTVAGIPSMHIC LDFIPELIAQPELEKQIFAIQLLSHLCIQYALPKSLSVARLAVNVMGTLLTVLTQAKR YALFMPTLPSLVSFCRAFPPLYEDIMSLLIQIGQVCASDVATQTRDIDPIITRLQQIK EKPSGWSQICKDSSYKNGSRDTGSMDPDVQLCHCIERTVIEIINMSVSGI" BASE COUNT 1143 a 877 c 976 g 1259 t ORIGIN 1 cttcctctca gaccagtacg gtggccgacg ggagtcagac gctggggatg aatgaaggtg 61 ctgggtgcag gttgaaaaag tctcccgctt ttccgttcct acagtcccgg ttctgccttt 121 gtgtggtgcc cccatccttc ccactttgta tcgacaaccc ggttggtccc ggcgtctgag 181 ttcttggtgt ccgagtcgac tcgaggcaca actagggttt ggggttccgg atatcgccta 241 ggcccaacat cggaccgcgc tctcgatttc tgccgcgtcc cgcctctagg acgcggagtc 301 cgtgtgcggt tccgtgaggc tggagggtag atcttaagga tcaacaaaca gtaataatga 361 ctgaatgtac aagtcttcag tttgtcagcc cttttgcttt tgaggcaatg cagaaggtgg 421 atgttgtttg cctggcatct ttaagtgatc cagaattaag acttcttctg ccctgtttgg 481 tacggatggc actttgtgca cctgctgacc agagccaaag ctgggctcag gataagaaac 541 tcatccttcg ccttctttct ggagtggaag ctgtcaactc cattgttgca ttgttgtccg 601 tggactttca tgctttagaa caagatgcca gcaaagaaca gcagcttagg cataaacttg 661 gaggaggcag tggagagagc atcctggtat cacagcttca gcatggactg acgttagagt 721 ttgaacacag tgattcacct cgtcgattgc gtcttgtgct tagtgaactg ttggcaatta 781 tgaacaaggt gtctgagtcc aacggagaat tttttttcaa gtcttctgaa ctttttgaga 841 gtccagtata tttggaggaa gctgcagatg tactttgtat tttacaagca gagctccctt 901 ccttgctccc tatagttgat gtagctgaag ctttgctaca tgttagaaat ggtgcctggt 961 tcttgtgtct cttggtggcc aatgttcctg atagttttaa tgaagtttgt aggggcctga 1021 taaaaaatgg agaacgacaa gatgaagaaa gtcttggagg aaggcgcagg acagatgcct 1081 tacgcttctt gtgtaaaatg aatccttctc aggccctcaa ggtccgaggc atggtggtgg 1141 aagaatgtca cttgccaggc cttggtgtgg ctttgacatt ggatcatact aaaaatgaag 1201 cttgtgagga tggagtgagt gacttggttt gttttgtaag tggtttgctt cttggaacaa 1261 atgcgaaagt ccggacttgg tttggaactt ttatccgaaa tggacagcag agaaaaagag 1321 agaccagcag ttctgtcctt tggcagatga gaaggcagct tcttctggag ttgatgggca 1381 ttcttcccac agtaagaagc acccgaattg tggaagaagc tgatgtggat atggagccca 1441 atgtgtctgt gtattcgggg ctgaaagaag agcatgttgt gaaagccagt gcactcttac 1501 gtctgtactg tgctttgatg gggatcgctg gactcaaacc aactgaagaa gaagctgagc 1561 aattactgca gttgatgacg agccgtcctc ctgctacgcc agctggggtt cgctttgttt 1621 cactttcctt ttgtatgcta caggcctttt ctacacttgt cagtacacct gaacaggagc 1681 agctgatggt ggtgtggcta agttggatga taaaagaaga agcgtatttt gagagtactt 1741 caggcgtctc tgcttctttt ggggagatgt tattattggt ggctatgtac tttcacagca 1801 accagcttag tgctatcatt gacttggtct gttccacttt ggggatgaag attgtaatta 1861 agccaagctc cttgagcagg atgaagacaa tcttcacaca ggaaattttt actgagcagg 1921 ttgtcacagc tcatgcagtt cgggtccctg tcaccagcaa cctgagtgcc aacattactg 1981 gatttttgcc tattcattgt atttaccagc ttctcaggag ccgttccttt accaagcaca 2041 aagtgtcaat aaaagattgg atttatagac agctgtgtga aacctctact ccacttcatc 2101 ctcaattact tcctttgatt gatgtgtaca taaattctat acttactcct gcgtcgaaat 2161 ctaatccaga agccacaaat cagccagtca cagaacagga gatactcaat attttccaag 2221 gagtcattgg gggtgacaac atccgcctta atcagcgttt cagtatcaca gcacagcttt 2281 tggtgctcta ctatatactg tcttatgaag aggctcttct agcaaacacg aagactttag 2341 ctgccatgca aagaaagccc aaatcatatt cttcttcttt aatggatcag attcctatca 2401 aattccttat tcgacaggct caagggctgc agcaggagtt gggagggttg cattcagctt 2461 tactacgtct ccttgctact aactacccac atttatgtat tgtggatgac tggatttgtg 2521 aagaagaaat cacagggact gatgccctgc tacggcgaat gctcctgact aataatgcta 2581 aaaatcattc tcccaaacaa ctccaagaag cattttcagc tgtcccagta aatcacacac 2641 aagtgatgca gattatagaa cacttgactc tactctctgc cagtgaactt ataccatatg 2701 cggaagtgtt aacatccaat atgagccagc tattgaattc aggggttcca cggagaattc 2761 tgcaaacagt caataaacta tggatggttc ttaatactgt gatgcctaga aggctatggg 2821 taatgacggt taatgcactt cagccttcaa taaagtttgt acgacaacaa aagtatactc 2881 agaatgacct gatgatagat cctctcattg tcctaaggtg tgatcagagg gttcacagat 2941 gccccccact gatggatatt accctacaca tgttgaatgg atatcttctc gcatctaaag 3001 cctaccttag tgctcatctg aaggaaacag agcaagatag gccttcccag aataatacaa 3061 ttggtttagt tggacaaact gatgctccgg aagttaccag ggaagaattg aaaaatgcat 3121 tactggccgc tcaggatagt gcagctgtcc agattctctt agagatttgc ctacctactg 3181 aagaggagaa agcaaatggt gtcaatccag atagcttgtt aagaaatgtt caaagtgtta 3241 ttaccaccag cgctccaaat aagggaatgg aggaaggaga agacaatttg ctctgtatcc 3301 ttcgagaagt tcagtgcctt atctgttgtc tcttgcacca aatgtacatt gcagatccca 3361 acattgctaa gcttgttcac tttcagggtt atccatgtga acttttgcct ctgacggtcg 3421 caggtattcc atctatgcac atctgtctag atttcatacc tgagcttatt gcacagccag 3481 aacttgagaa acagatattt gctatccagt tgctttctca cttgtgtata caatatgcat 3541 taccaaagtc acttagtgtg gctcgtttag ctgtcaatgt catgggaact ttgttaacag 3601 ttttaacaca ggctaagcgg tatgctcttt ttatgccaac tctgccaagt ttggtctctt 3661 tttgtcgagc atttcctcca ttgtatgagg atattatgtc tttgctgatc caaatagggc 3721 aagtttgtgc ctctgatgtt gccactcaga caagagacat tgatccaatt attacacgtc 3781 ttcaacaaat aaaggagaaa ccaagtggat ggtctcaaat ctgtaaagat tcatcttata 3841 aaaatggatc cagggacact ggaagcatgg atcctgatgt acagctctgt cactgtattg 3901 aaagaacagt aattgaaata ataaatatga gtgttagtgg aatttaaaac aaaatttaaa 3961 acaacaaaaa gttgtttgct gcatataccc aacatgaatc tgcatattag taacaactct 4021 aaactgaatg ggaacagtaa agtattgtct tggaatcact aaaacaattc aattcaacat 4081 gagtatagtt tagaacttta tgagaattat gcttgcttgt ttctgattgg cacatctttg 4141 gatctacttt gctgatatgt ttctattgta gcagctgagc tttttttttt tccactggga 4201 acacatgtaa gaaactcatt attggaaagg gaatttggcc ttgtatttag ctttt //