LOCUS AK299021 1021 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54624 complete cds, highly similar to Histone
deacetylase 11.
ACCESSION AK299021
VERSION AK299021.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1021)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1021
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2026447"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000493645"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 281..748
/codon_start=1
/note="highly similar to Histone deacetylase 11"
/protein_id="BAG61100.1"
/transl_table=1
/translation="MDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLD
KVERNIKKSLQEHLPDVVVYNAGTDILEGGRLGGLSISPAGIVKRDELVFRMVRGRRV
PILMVTSGGYQKRTARIIADSILNLFGLGLIGPESPSVSAQNSDTPLLPPAVP"
BASE COUNT 203 a 294 c 319 g 205 t
ORIGIN
1 ggtcgcggag ctgcggccag ctttgggagg gccggccccg ggatgctaca cacaacccag
61 ctgtaccagc atgtgccaga gacacgctgg ccaatcgtgt actcgccgcg ctacaacatc
121 accttcatgg gcctggagaa gctgcatccc tttgatgccg gaaaatgggg caaagtgatc
181 aatttcctaa aagtttctgt ttgagcgtgt ggagggcatc tccagggcta ccatcattga
241 tcttgatgcc catcagggca atgggcatga gcgagacttc atggacgaca agcgtgtgta
301 catcatggat gtctacaacc gccacatcta cccaggggac cgctttgcca agcaggccat
361 caggcggaag gtggagctgg agtggggcac agaggatgat gagtacctgg ataaggtgga
421 gaggaacatc aagaaatccc tccaggagca cctgcccgac gtggtggtat acaatgcagg
481 caccgacatc ctcgaggggg gccgccttgg ggggctgtcc atcagcccag cgggcatcgt
541 gaagcgggat gagctggtgt tccggatggt ccgtggccgc cgggtgccca tccttatggt
601 gacctcaggc gggtaccaga agcgcacagc ccgcatcatt gctgactcca tacttaatct
661 gtttggcctg gggctcattg ggcctgagtc acccagcgtc tccgcacaga actcagacac
721 accgctgctt ccccctgcag tgccctgacc cttgctgccc tgcctgtcac gtggccctgc
781 ctatccgccc cttagtgctt tttgttttct aacctcatgg ggtggtggag gcagccttca
841 gtgagcatgg aggggcaggg ccatccctgg ctggggcctg gagctggccc ttcctctact
901 tttccctgct ggaagccaga agggcttgag gcctctatgg gtgggggcag aaggcagagc
961 ctgtgtccca gggggaccca cacgaagtca ccagcccata ggtccaggga ggcaggcagt
1021 t
//