LOCUS AK298984 1270 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ52984 complete cds, highly similar to Homo sapiens mesoderm specific transcript homolog (MEST), transcript variant 1, mRNA. ACCESSION AK298984 VERSION AK298984.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1270) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1270 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RI2020072" /clone_lib="NT2RI2" /db_xref="H-InvDB:HIT000493608" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells treated 2-weeks mitotic inhibitor after 5-weeks retinoic acid (RA) induction." /note="majorly NT2 neuron" /organism="Homo sapiens" CDS 171..1136 /codon_start=1 /note="highly similar to Homo sapiens mesoderm specific transcript homolog (MEST), transcript variant 1, mRNA" /protein_id="BAG61078.1" /transl_table=1 /translation="MVRRDRLRRMREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWK SSDSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRPH HYSIFEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRYKQNRSGRLTIKSLC LSNGGIFPETHRPLLLQKLLKDGGVLSPILTRLMNFFVFSRGLTPVFGPYTRPSESEL WDMWAGIRNNGGNLVIDSLLQYINQRKKFRRRWVGALASVTIPIHFIYGPLDPVNPYP EFLELYRKTLPRSTVSILDDHISHYPQLEDPMGFLNAYMGFINSF" BASE COUNT 259 a 352 c 335 g 324 t ORIGIN 1 agtgccgcag cgcacgccgg agtggctgta gctgcccggc gcggcgccgc cctgcgcggg 61 ctgtgggctg cgggctgcgc ccccgctgct ggccagctct gcacggctgc gggctctgcg 121 gcgcccggtg ctctgcaacg ctgcggcggg cggcatggga taacgcggcc atggtgcgcc 181 gagatcgcct ccgcaggatg agggagtggt gggtccaggt ggggctgctg gccgtgcccc 241 tgcttgctgc gtacctgcac atcccacccc ctcagctctc ccctgccctt cactcatgga 301 agtcttcaga ctctgtgggt gtggttggaa gtccagagat agttgtgctt ttacacggtt 361 ttccaacatc cagctacgac tggtacaaga tttgggaagg tctgaccttg aggtttcatc 421 gggtgattgc ccttgatttc ttaggctttg gcttcagtga caaaccgaga ccacatcact 481 attccatatt tgagcaggcc agcatcgtgg aagcgctttt gcggcatctg gggctccaga 541 accgcaggat caaccttctt tctcatgact atggagatat tgttgctcag gagcttctct 601 acaggtacaa gcagaatcga tctggtcggc ttaccataaa gagtctctgt ctgtcaaatg 661 gaggtatctt tcctgagact caccgtccac tccttctcca aaagctactc aaagatggag 721 gtgtgctgtc acccatcctc acacgactga tgaacttctt tgtattctct cgaggtctca 781 ccccagtctt tgggccgtat actcggccct ctgagagtga gctgtgggac atgtgggcag 841 ggatccgcaa caatggcggg aacttagtca ttgacagtct cttacagtac atcaatcaga 901 ggaagaagtt cagaaggcgc tgggtgggag ctcttgcctc tgtaactatc cccattcatt 961 ttatctatgg gccattggat cctgtaaatc cctatccaga gtttttggag ctgtacagga 1021 aaacgctgcc gcggtccaca gtgtcgattc tggatgacca cattagccac tatccacagc 1081 tagaggatcc catgggcttc ttgaatgcat atatgggctt catcaactcc ttctgagctg 1141 gaaagagtag cttccctgta ttacctcccc tactccctta tgtgttgtgt attccactta 1201 ggaagaaatg cccaaaagag gtcctggcca tcaaacataa ttctctcaca aagtccactt 1261 tactcaaatt //