LOCUS AK298981 989 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61684 complete cds, highly similar to Homo
sapiens poliovirus receptor-related 4 (PVRL4), mRNA.
ACCESSION AK298981
VERSION AK298981.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 989)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..989
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2018603"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000493605"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 76..735
/codon_start=1
/note="highly similar to Homo sapiens poliovirus
receptor-related 4 (PVRL4), mRNA"
/protein_id="BAG61075.1"
/transl_table=1
/translation="MLKCLSEGQPPPSYNWTRLDGPLPSGVRVDGDTLGFPPLTTEHS
GIYVCHVSNEFSSRDSQVTVDVLDPQEDSGKQVDLVSASVVVVGVIAALLFCLLVVVV
VLMSRYHRRKAQQMTQKYEEELTLTRENSIRRLHSHHTDPRSQSEEPEGRSYSTLTTV
REIETQTELLSPGSGRAEEEEDQDEGIKQAMNHFVQENGTLRAKPTGNGIYINGRGHL
V"
BASE COUNT 203 a 276 c 292 g 218 t
ORIGIN
1 attccagtcc ttgctgaggc ctctgtgagg ggccttgaag accaaaatct gtggcacatt
61 ggcagagaag gagctatgct caagtgcctg agtgaagggc agccccctcc ctcatacaac
121 tggacacggc tggatgggcc tctgcccagt ggggtacgag tggatgggga cactttgggc
181 tttcccccac tgaccactga gcacagcggc atctacgtct gccatgtcag caatgagttc
241 tcctcaaggg attctcaggt cactgtggat gttcttgacc cccaggaaga ctctgggaag
301 caggtggacc tagtgtcagc ctcggtggtg gtggtgggtg tgatcgccgc actcttgttc
361 tgccttctgg tggtggtggt ggtgctcatg tcccgatacc atcggcgcaa ggcccagcag
421 atgacccaga aatatgagga ggagctgacc ctgaccaggg agaactccat ccggaggctg
481 cattcccatc acacggaccc caggagccag agtgaagagc ccgagggccg cagttactcc
541 acgctgacca cggtgaggga gatagaaaca cagactgaac tgctgtctcc aggctctggg
601 cgggccgagg aggaggaaga tcaggatgaa ggcatcaaac aggccatgaa ccattttgtt
661 caggagaatg ggaccctacg ggccaagccc acgggcaatg gcatctacat caatgggcgg
721 ggacacctgg tctgacccag gcctgcctcc cttccctagg cctggctcct tctgttgaca
781 tgggagattt tagctcatct tgggggcctc cttaaacacc cccatttctt gcggaagatg
841 ctccccatcc cactgactgc ttgaccttta cctccaaccc ttctgttcat cgggagggct
901 ccaccaattg agtctctccc accatgcatg caggtcactg tgtgtgtgca tgtgtgcctg
961 tgtgagtgtt gactgactgt gtgtgtgtg
//