LOCUS AK298961 978 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ57160 complete cds, highly similar to Ras-related protein Rab-11A. ACCESSION AK298961 VERSION AK298961.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 978) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..978 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RI2016635" /clone_lib="NT2RI2" /db_xref="H-InvDB:HIT000493585" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells treated 2-weeks mitotic inhibitor after 5-weeks retinoic acid (RA) induction." /note="majorly NT2 neuron" /organism="Homo sapiens" CDS 131..571 /codon_start=1 /note="highly similar to Ras-related protein Rab-11A" /protein_id="BAG61057.1" /transl_table=1 /translation="MGTRDDEYDYLFKVVLIGDSGVGKSNLTYENVERWLKELRDHAD SNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI YRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI" BASE COUNT 265 a 221 c 199 g 293 t ORIGIN 1 gcagcggcag ggaggggctc ttcacccagt ccggcagttg aagctcggcg ctcgggttac 61 ccctgcagcg acgccccctg gtcccacaga taccactgct gctcccgccc tttcgctcct 121 cggccgcgca atgggcaccc gcgacgacga gtacgactac ctctttaaag ttgtccttat 181 tggagattct ggtgttggaa agagtaatct cacatatgaa aatgtagagc gatggctgaa 241 agaactgaga gatcatgctg atagtaacat tgttatcatg cttgtgggca ataagagtga 301 tctacgtcat ctcagggcag ttcctacaga tgaagcaaga gcttttgcag aaaagaatgg 361 tttgtcattc attgaaactt cggccctaga ctctacaaat gtagaagctg cttttcagac 421 aattttaaca gagatttacc gcattgtttc tcagaagcaa atgtcagaca gacgcgaaaa 481 tgacatgtct ccaagcaaca atgtggttcc tattcatgtt ccaccaacca ctgaaaacaa 541 gccaaaggtg cagtgctgtc agaacatcta aggcatttct cttctcccct agaaggctgt 601 gtatagtcca tttcccaggt ctgagattta aatatatttg taattcttgt gtcacttttg 661 tgttttatta cttcatactt atgaattttt ccatgtccta agtcttttga ttttagcttt 721 ataaaatcat ccacttgtcc cgaatgactg cagctttttt tcatgctatg gcttcactag 781 ccttagttta ataaactgaa tgtttggatt cctcagttat tgtttacttt tcatcatgga 841 agcctgtcac tgtatgtagg acataataga acttgatcac ttgaagctca gacctattgg 901 tcttgatcaa atcaaactaa gaagacctta gaaataagct accattttgc cacagagcag 961 cttataggta atacactc //