LOCUS AK298960 2195 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ60809 complete cds, highly similar to Homo sapiens cytokeratin type II (K6HF), mRNA. ACCESSION AK298960 VERSION AK298960.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2195) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2195 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RI2016338" /clone_lib="NT2RI2" /db_xref="H-InvDB:HIT000493584" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells treated 2-weeks mitotic inhibitor after 5-weeks retinoic acid (RA) induction." /note="majorly NT2 neuron" /organism="Homo sapiens" CDS 60..1877 /codon_start=1 /note="highly similar to Homo sapiens cytokeratin type II (K6HF), mRNA" /protein_id="BAG61056.1" /transl_table=1 /translation="MPRECHQKALSTSSAPPPQDAHKSHETRALQPPVFSTACTSPPQ VPSRRPSSPTMSRQSSITFQSGSRRGFSTTSAITPAAGRSRFSSVSVARSAAGSGGLG RISSAGASFGSRSLYNLGGAKRVSINGCGSSCRSGFGGRASNRFGVNSGFGYGGGVGG GFSGPSFPVCPPGGIQEVTVNQSLLTPLHLQIDPTIQRVRAEEREQIKTLNNKFASFI DKVRFLEQQNKVLETKWALLQEQGSRTVRQNLEPLFDSYTSELRRQLESITTERGRLE AELRNMQDVVEDFKVRYEDEINKRTAAENEFVALKKDVDAAYMNKVELEAKVKSLPEE INFIHSVFDAELSQLQTQVGDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRAEA ESWYQTKYEELQVTAGRHGDDLRNTKQEISEMNRMIQRLRAEIDSVKKQCSSLQTAIA DAEQRGELALKDARAKLVDLEEALQKAKQDMARLLREYQELMNIKLALDVEIATYRKL LEGEECRLSGEGVSPVNISVVTSTLSSGYGSGSSIGGGNLGLGGGSGYSFTTSGGHSL GAGLGGSGFSATSNRGLGGSGSSVKFVSTTSSSQKSYTH" BASE COUNT 484 a 656 c 632 g 423 t ORIGIN 1 agccagtggc ccttacacca tttcccgagg gatgccgagt gtgagctcag ggttggcgga 61 tgcccaggga atgccatcag aaggccctct ccactagcag tgccccgccc ccacaggatg 121 ctcataaaag ccacgagacc agggctctcc agccacctgt cttctccact gcctgtacca 181 gcccacctca ggtgccttct cgccggcctt cctcacccac catgtctcgg cagtcctcca 241 tcaccttcca gtctggcagc cgcaggggct tcagcaccac ctcggccatc accccggcag 301 ctggccgctc ccgcttcagt tctgtctctg tggcccgctc tgcagcaggg agtgggggcc 361 tgggaaggat cagcagtgct ggggccagct ttggaagccg cagcctctac aacctggggg 421 gtgccaagcg ggtctccatc aatgggtgtg gcagcagctg ccgaagtggc tttggtggca 481 gggccagcaa caggtttgga gtcaacagtg gatttggcta tgggggtgga gttggaggag 541 gcttcagtgg ccccagcttc cccgtgtgtc cccctggagg catccaagag gtcactgtca 601 accagagtct cctgactcct cttcacctgc aaatcgaccc caccatccag cgggtgcggg 661 ccgaggagcg cgagcagatc aagaccctca acaataagtt cgcctccttc atcgacaagg 721 tgaggttctt ggagcagcag aacaaggtcc tggagaccaa gtgggccctc ctgcaggagc 781 agggctccag gactgtgagg cagaacctag agcccctctt tgattcctat accagtgagc 841 tccgacggca gctggaaagc atcaccaccg agaggggcag gcttgaagct gaactgagga 901 acatgcagga tgttgtggaa gatttcaaag tcaggtacga agatgaaatt aacaagcgca 961 cagctgctga gaatgaattt gtagccctga aaaaggacgt agatgctgcc tatatgaaca 1021 aggtggagct ggaagccaag gtcaaatctc tgcccgagga gatcaacttc atccactcag 1081 tctttgatgc agagctgtcc cagttgcaga cccaggtcgg tgacacatcc gtggtgctgt 1141 ccatggacaa caaccgcaac ctggacctgg atagtatcat cgccgaggtc aaagcacaat 1201 acgaggacat tgccaaccgc agccgggccg aggctgagtc ctggtaccag accaagtacg 1261 aggagctgca ggtcaccgca ggcagacatg gggatgacct tcgaaacacc aaacaagaga 1321 tctctgaaat gaaccgcatg atccagaggc tgagagctga gattgacagc gtcaagaagc 1381 agtgttccag cttgcaaacg gccattgctg atgcagagca gcggggagaa ctggctctca 1441 aggatgcacg ggccaagctg gtggaccttg aggaggccct gcagaaggcc aagcaggaca 1501 tggctcggct cctgcgtgag taccaggagc tgatgaacat caagctggcc ctggacgtgg 1561 agatcgccac ctaccgcaag ctgctggaag gcgaggagtg caggttgagt ggagagggag 1621 tttctccagt taacatttct gtggtcacct ctactctttc cagtggctat ggaagcggca 1681 gcagcattgg aggtggaaac ctgggcctcg gtgggggcag cggctactcc ttcaccacca 1741 gtggtgggca tagcctgggt gcaggcctgg gaggttctgg attcagtgcc accagcaacc 1801 ggggcttagg gggcagtggt tctagcgtca agtttgtctc caccacatcc tccagccaga 1861 agagctacac gcactaagag agccccatgg ctccctctac cctgccttga ggcctgtttg 1921 cagtcacacc tggacaccag ggtcctcctc cttcctctct ccttgtaagg tgcacctgtg 1981 ctgctgggag cctggagtac tggctatacc cattcccagg cctaagccag cctctccctc 2041 ctgacagtgc ccagactgcc agcagcaccc gtctgttaca catgtgaaac caaagcctgc 2101 tctctcctaa ggctctcatt cagcctatct tgcgaggccc gggcagctgg aaagtcctcc 2161 tccagctcca cctccctccc tccctccaga tgcag //