LOCUS       AK298939                1333 bp    mRNA    linear   HUM 21-JAN-2009
DEFINITION  Homo sapiens cDNA FLJ50836 complete cds, highly similar to
            Syndecan-2 precursor.
ACCESSION   AK298939
VERSION     AK298939.1
KEYWORDS    FLI_CDNA; oligo capping.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1333)
  AUTHORS   Isogai,T. and Yamamoto,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
            Contact:Takao Isogai
            Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
            Chiyoda-ku, Tokyo 101-0044, Japan
            E-mail :flj-cdna@nifty.com
REFERENCE   2
  AUTHORS   Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
            Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
            Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
            Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
  TITLE     NEDO human cDNA sequencing project focused on splicing variants
  JOURNAL   Unpublished (2007)
COMMENT     Human cDNA sequencing project focused on splicing variants of mRNA
            in NEDO functional analysis of protein and research application
            project supported by Ministry of Economy, Trade and Industry,
            Japan; cDNA selection for complete cds sequencing: Reverse
            Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
            (Hitachi) and Japan Biological Informatics Consortium, Japan
            (JBIC); cDNA complete cds sequencing: JBIC; cDNA library
            construction: Helix Research Institute supported by Japan Key
            Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
            Research Association for Biotechnology, Japan, Biotechnology
            Center, National Institute of Technology and Evaluation, Japan and
            HRI; cDNA mapping to human genome: Central Research Laboratory,
            Hitachi; evaluation and annotation: REPRORI.
FEATURES             Location/Qualifiers
     source          1..1333
                     /cell_line="NT2"
                     /cell_type="teratocarcinoma"
                     /clone="NT2RI2013267"
                     /clone_lib="NT2RI2"
                     /db_xref="H-InvDB:HIT000493563"
                     /db_xref="taxon:9606"
                     /mol_type="mRNA"
                     /note="cloning vector: pME18SFL3"
                     /note="mRNA from NT2 neuronal precursor cells treated
                     2-weeks mitotic inhibitor after 5-weeks retinoic acid
                     (RA) induction."
                     /note="majorly NT2 neuron"
                     /organism="Homo sapiens"
     CDS             248..766
                     /codon_start=1
                     /note="highly similar to Syndecan-2 precursor"
                     /protein_id="BAH12908.1"
                     /transl_table=1
                     /translation="MYLDNSSIEGASGVYPIDDDDYASASGSGADEDVESPELTTTRP
                     LPKILLTSAAPKVETTTLNIQNKIPAQTKSPEETDKEKVHLSDSERKMDPAEEDTNVY
                     TEKHSDSLFKRTEVLAAVIAGGVIGFLFAIFLILLLVYRMRKKDEGSYDLGERKPSSA
                     AYQKAPTKEFYA"
BASE COUNT          393 a          266 c          261 g          413 t
ORIGIN      
        1 gtctttgttc cagagcattt gccaaagcca ggtatgtcca gtcaaaggga taatgcaacc
       61 gatagctccc aagcctccat atcctcagct gttgcttgtt gccactgagg ggtggacatg
      121 ttttcatttg gcatcttaca tgtgagcatc atgactacag actcatctta taccaattaa
      181 ataataaact ccactctgtg ggcagaggtt ctgtctggag agagcagagc tgacatctga
      241 taaagacatg taccttgaca acagctccat tgaaggagct tcaggagtgt atcctattga
      301 tgacgatgac tacgcttctg cgtctggctc gggagctgat gaggatgtag agagtccaga
      361 gctgacaaca actcgaccac ttccaaagat actgttgact agtgctgctc caaaagtgga
      421 aaccacgacg ctgaatatac agaacaagat acctgctcag acaaagtcac ctgaagaaac
      481 tgataaagag aaagttcacc tctctgactc agaaaggaaa atggacccag ccgaagagga
      541 tacaaatgtg tatactgaga aacactcaga cagtctgttt aaacggacag aagtcctagc
      601 agctgtcatt gctggtggag ttattggctt tctctttgca atttttctta tcctgctgtt
      661 ggtgtatcgc atgagaaaga aggatgaagg aagctatgac cttggagaac gcaaaccatc
      721 cagtgctgct tatcagaagg cacctactaa ggagttttat gcgtaaaact ccaacttagt
      781 gtctctattt atgagatcac tgaacttttc aaaataaagc ttttgcatag aataatgaag
      841 atctttgttt tttgttttca ttaaagagcc attctggcac tttaatgata aaatcccatt
      901 gtatttaaaa catttcatgt atttctttag aacaacataa aattaaaatt taacatctgc
      961 agtgttctgt gaatagcagt ggcaaaatat tatgttatga aaaccctcga tgttcatgga
     1021 attggtttaa acttttatgc gcaaatacaa aatgattgtc tttttcctat gactcaaaga
     1081 tgaaagctgt ttcatttgtg tcagcatgtc tcagattgac cttaccaagt tggtcttact
     1141 ttgttaattt atctgttgtc cccttcctct cctctgccct cccttcttgt gcccttaaaa
     1201 ccaaacccta tgccttctgt agctgtcatg gtgcaatttg tctttggaaa attcagataa
     1261 tggtaattta gtgtatatgt gattttcaaa tatgtaaact ttaacttcca ctttgtataa
     1321 atttttaagt gtc
//