LOCUS AK298922 1876 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ51945 complete cds, highly similar to Bardet-Biedl syndrome 4 protein. ACCESSION AK298922 VERSION AK298922.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1876) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1876 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RI2008885" /clone_lib="NT2RI2" /db_xref="H-InvDB:HIT000493546" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells treated 2-weeks mitotic inhibitor after 5-weeks retinoic acid (RA) induction." /note="majorly NT2 neuron" /organism="Homo sapiens" CDS 116..1639 /codon_start=1 /note="highly similar to Bardet-Biedl syndrome 4 protein" /protein_id="BAG61027.1" /transl_table=1 /translation="MIWNTRNSTYIFTAPEFPILEKQNWLIHLHYIRKDYEACKAVIK EQLQETQGLCEYAIYVQALIFRLEGNIQESLELFQTCAVLSPQSADNLKQVARSLFLL GKHKAAIEVYNEAAKLNQKDWEISHNLGVCYIYLKQFNKAQDQLHNALNLNRHDLTYI MLGKIHLLEGDLDKAIEVYKKAVEFSPENTELLTTLGLLYLQLGIYQKAFEHLGNALT YDPTNYKAILAAGSMMQTHGDFDVALTKYRVVACAVPESPPLWNNIGMCFFGKKKYVA AISCLKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAINFQPKMGELYMLLAV ALTNLEDTENAKRAYAEAVHLDKCNPLVNLNYAVLLYNQGEKKNALAQYQEMEKKVSL LKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKDPKSKHQTTSTSKPASFQQPL GSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPEPAVESSPTETSEQIREK" BASE COUNT 564 a 427 c 447 g 438 t ORIGIN 1 gcagcggtgg gctgagctaa aatggctgag gagagagtcg cgacgagaac tcaatttcct 61 gtatctactg agtctcaaaa accccggcag aaaaaagggg gagttggagt gagcaatgat 121 ttggaatacc agaaattcaa cttatatatt tacagctcca gagtttccta ttttggagaa 181 gcagaactgg ttgattcatc ttcattatat ccggaaagat tatgaagcct gcaaggctgt 241 tatcaaagaa cagcttcaag agactcaggg attgtgtgaa tatgctatct atgtccaagc 301 attgatattt cgcctagaag gaaatatcca agaatcccta gaactcttcc agacatgtgc 361 agttcttagt cctcagagtg ctgataacct caagcaggtg gccagatctt tatttctttt 421 gggaaaacat aaagctgcca ttgaagtata taatgaagca gctaaactca accagaaaga 481 ttgggagatc agccataacc taggagtttg ctacatatac ctgaagcagt tcaacaaggc 541 acaagaccag ttgcacaatg ccctgaatct taataggcac gatctgactt atataatgct 601 ggggaagatc cacttgctgg agggagactt ggacaaggcc attgaagtct acaagaaagc 661 agtggagttc tcaccagaaa atacagagct tcttacaact ttaggattac tctacttaca 721 gctcggcatt taccagaagg catttgaaca tcttggcaat gcactgactt atgaccctac 781 caactacaag gccatcttgg cagcaggcag catgatgcag acccacgggg actttgatgt 841 tgccctcacc aaatacagag ttgtggcttg tgctgttcca gaaagtcctc cactctggaa 901 taacattgga atgtgtttct ttggcaagaa gaaatatgtg gcggccatca gctgcctgaa 961 acgagccaac tacttggcac ccttcgattg gaagattctg tataatttgg gccttgtcca 1021 tttgaccatg cagcagtatg catcagcttt tcattttctc agtgcggcca tcaacttcca 1081 gccaaagatg ggggagctct acatgctctt ggcagtggct ctgaccaatc tggaagatac 1141 agaaaatgcc aagagagcct acgcagaagc agtccacctg gataagtgta accctttagt 1201 aaacctgaac tatgctgtgc tgctgtacaa ccagggcgag aagaagaacg ccctggccca 1261 atatcaggag atggagaaga aagtcagcct actcaaggac aatagctctc tggaatttga 1321 ctctgagatg gtggagatgg ctcagaagtt gggagctgct ctccaggttg gggaggcact 1381 ggtctggacc aaaccagtta aagatcccaa atcaaagcac cagaccactt caaccagcaa 1441 acctgccagt ttccagcagc ctctgggctc taatcaagct ctaggacagg caatgtcttc 1501 agcagctgca tacaggacgc tcccctcagg tgctggagga acatcccagt tcacaaagcc 1561 cccatctctt cctctggagc cagagcctgc ggtggaatca agtccaactg aaacatcaga 1621 acaaataaga gagaaataag aatagaatga atgaccccaa aatagggttt tcttgggcga 1681 ggatgtgctg gattaggaaa ggtgacatga cacaggcaga gcagagtggc acccaccaca 1741 gaatacagtg tgtgttatta cgaggagcca gcagttgagc ctaaggtcct tctacctacc 1801 tggtattggc atttgaggtc ggaaaccctc tactgcccca taagccagga aaagtgaaaa 1861 gagaacacag ttcctt //