LOCUS AK298919 2000 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ58483 complete cds, highly similar to Homo sapiens two pore segment channel 2 (TPCN2), mRNA. ACCESSION AK298919 VERSION AK298919.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2000) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2000 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RI2008163" /clone_lib="NT2RI2" /db_xref="H-InvDB:HIT000493543" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells treated 2-weeks mitotic inhibitor after 5-weeks retinoic acid (RA) induction." /note="majorly NT2 neuron" /organism="Homo sapiens" CDS 38..1750 /codon_start=1 /note="highly similar to Homo sapiens two pore segment channel 2 (TPCN2), mRNA" /protein_id="BAG61025.1" /transl_table=1 /translation="MAEPQAESEPLLGGARGGGGDWPAGLTTYRSIQVGPGAAARWDL CIDQAVVFIEDAIQYRSINHRVDASSMWLYRRYYSNVCQRTLSFTIFLILFLAFIETP SSLTSTADVRYRAAPWEPPCGLTESVEVLCLLVFAADLSVKGYLFGWAHFQKNLWLLG YLVVLVVSLVDWTVSLSLVCHEPLRIRRLLRPFFLLQNSSMMKKTLKCIRWSLPEMAS VGLLLAIHLCLFTMFGMLLFAGGKQDDGQDRERLTYFQNLPESLTSLLVLLTTANNPD VMIPAYSKNRAYAIFFIVFTVIGSLFLMNLLTAIIYSQFRGYLMKSLQTSLFRRRLGT RAAFEALSSMVGEGGAFPQAVGVKPQNLLQVLQKVQLDSSHKQAMMEKVRSYGSVLLS AEEFQKLFNELDRSVVKEHPPRPEYQSPFLQSAQFLFGHYYFDYLGNLIALANLVSIC VFLVLDADVLPAERDDFILGILNCVFIVYYLLEMLLKVFALGLRGYLSYPSNVFDGLL TVVLLNFLHKWDPRSHLQPLAGTPEATYQMTVELLFRDILEEPEEDELTERLSQHPHL WLCR" BASE COUNT 349 a 595 c 599 g 457 t ORIGIN 1 agcttctgag ggtcgggtcc agcgcgtggg ctgctggatg gcggaacccc aggcggagtc 61 ggagcccctg ctgggcgggg cccgcggcgg tggcggcgac tggccggcgg ggctgaccac 121 ttaccgcagc atccaagtcg gccctggtgc cgcggccagg tgggacctct gcattgatca 181 ggctgtggtc ttcatcgaag atgctattca gtaccgctcc atcaaccacc gggtggatgc 241 cagctcgatg tggctttacc gacggtatta ctcgaacgta tgccaacgga ctttgagctt 301 caccatcttc ttgatcctgt ttttggcttt tatcgagacc ccatcctcac tcaccagcac 361 ggcggacgtg cgctaccgcg ctgccccctg ggagccgccc tgcggcctga ccgagagtgt 421 cgaggtgctc tgcctgctgg tctttgcggc cgacctctct gtgaagggtt acctgttcgg 481 gtgggcccat ttccagaaaa acctttggct gctgggctac ctcgtggtgc tggtggtgtc 541 tctggtggac tggaccgtgt ccctgagtct cgtgtgtcat gagcccctgc ggatccgccg 601 gcttctccgt cccttcttcc tgctgcagaa ctcctctatg atgaagaaga ccttgaaatg 661 catccgctgg tcgctgccgg aaatggccag cgtcgggctg ctgctggcca tccacctgtg 721 cctcttcacc atgttcggaa tgctgctgtt cgctggtggg aagcaggatg atgggcagga 781 cagggagagg ctgacctact tccagaacct gcctgagtct ctgacttccc tcctggtgct 841 gctgaccacg gccaacaacc ccgatgtgat gattcctgcg tattccaaga accgggccta 901 tgccatcttc ttcatagtct tcactgtgat aggaagcctg tttctgatga acctgctgac 961 agccatcatc tacagtcagt tccggggcta cctgatgaaa tctctccaga cctcgctgtt 1021 tcggaggcgg ctgggaaccc gggctgcctt tgaagcccta tcctccatgg tgggggaggg 1081 aggagccttc cctcaggcag ttggggtgaa gccccagaac ttgctgcagg tgcttcagaa 1141 ggtccagctg gacagctccc acaaacaggc catgatggag aaggtgcgtt cctacggcag 1201 tgttctgctg tcagctgagg agtttcagaa gctcttcaac gagcttgaca gaagtgtggt 1261 taaagagcac ccgccgaggc ccgagtacca gtctccgttt ctgcagagcg cccagttcct 1321 cttcggccac tactactttg actacctggg gaacctcatc gccctggcaa acctggtgtc 1381 catttgcgtg ttcctggtgc tggatgcaga tgtgctgcct gctgagcgtg atgacttcat 1441 cctggggatt ctcaactgcg tcttcattgt gtactacctg ttggagatgc tgctcaaggt 1501 ctttgccctg ggcctgcgag ggtacctgtc ctaccccagc aacgtgtttg acgggctcct 1561 caccgttgtc ctgctgaact tccttcacaa gtgggacccc cgcagccacc tgcagcccct 1621 tgctgggacc ccagaggcca cctaccagat gactgtggag ctcctgttca gggatattct 1681 ggaggagccc gaggaggatg agctcacaga gaggctgagc cagcacccgc acctgtggct 1741 gtgcaggtga cgtccgggct gccgtcccag caggggcggc aggagagaga ggctggccta 1801 cacaggtgcc cgtcatggaa gaggcggcca tgctgtggcc agccaggcag gaagagacct 1861 ttcctctgac ggaccactaa gctggggaca ggaaccaagt cctttgcgtg tggcccaaca 1921 accgtctaca gaacagctgc tggtgcttca gggaggcgcc gtgccctccg ctttctttta 1981 tagctgcttc agtgagaatt //