LOCUS AK298911 1736 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ58212 complete cds, highly similar to
PolypeptideN-acetylgalactosaminyltransferase 11 (EC 2.4.1.41).
ACCESSION AK298911
VERSION AK298911.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1736)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1736
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2005228"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000493535"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 83..1666
/codon_start=1
/note="highly similar to
PolypeptideN-acetylgalactosaminyltransferase 11 (EC
2.4.1.41)"
/protein_id="BAH12901.1"
/transl_table=1
/translation="MPQPESQKAAILGCGQGGMIFNERDQELRDLGYQKHAFNMLISD
RLGYHRDVPDTRNAACKEKFYPPDLPAASVVICFYNEAFSALLRTVHSVIDRTPAHLL
HEIILVDDDSDFDDLKGELDEYVQKYLPGKIKVIRNTKREGLIRGRMIGAAHATGEVL
VFLDSHCEVNVMWLQPLLAAIREDRHTVVCPVIDIISADTLAYSSSPVVRGGFNWGLH
FKWDLVPLSELGRAEGATAPIKSPTMAGGLFAMNRQYFHELGQYDSGMDIWGGENLEI
SFRIWMCGGKLFIIPCSRVGHIFRKRRPYGSPEGQDTMTHNSLRLAHVWLDEYKEQYF
SLRPDLKTKSYGNISERVELRKKLGCKSFKWYLDNVYPEMQISGSHAKPQQPIFVNRG
PKRPKVLQRGRLYHLQTNKCLVAQGRPSQKGGLVVLKACDYSDPNQIWIYNEEHELVL
NSLLCLDMSETRSSDPPRLMKCHGSGGSQQWTFGKNNRLYQVSVGQCLRAVDPLGQKG
SVAMAICDGSSSQQWHLEG"
BASE COUNT 438 a 405 c 490 g 403 t
ORIGIN
1 gcgacgcctg gctgctgggc cccggggcag ttcagcccgc gccgctcctg cgggtcggac
61 tggggctgtg gcgggagaga agatgccgca gcccgagtcc cagaaggcgg cgatcctggg
121 ctgcgggcaa ggcggtatga tttttaatga acgcgatcaa gagttgagag acttgggcta
181 tcagaaacat gcttttaata tgcttatcag tgaccgcttg ggctaccaca gagatgtgcc
241 agacacaagg aatgcagcat gtaaagaaaa gttctaccca cctgacctgc cagctgctag
301 tgttgttatc tgtttctata atgaagcgtt ttctgccttg cttcggacag tgcacagtgt
361 catagaccgc acgccagcac acctgcttca tgagatcatc cttgtggatg atgatagtga
421 ctttgatgat ttgaaaggag aactagatga atatgtccaa aaatacctcc ctggaaaaat
481 taaagtcata agaaatacaa agcgtgaggg gttgattcga gggagaatga ttggcgcggc
541 ccacgcgaca ggagaagtcc ttgtgttcct ggacagccac tgtgaagtga atgtgatgtg
601 gctgcagccc ttgctggccg ccatccgtga ggaccggcac accgtggtgt gcccagtgat
661 tgacatcatc agcgccgaca cgctggccta cagctcgtcc cctgtcgtcc gcggagggtt
721 caactgggga ctgcacttca aatgggatct tgtccccctt tctgagctag gacgagcgga
781 gggagccact gcaccaataa agtcaccaac aatggctgga ggtttgtttg ccatgaacag
841 acagtatttc catgaacttg gacagtatga tagtggcatg gatatctggg gaggagaaaa
901 tttggaaata tcatttcgga tctggatgtg tggcggtaag ctcttcatca tcccttgctc
961 tagagtagga cacattttcc gaaaaaggcg accatatgga tctcccgaag gccaggacac
1021 catgacacac aactctttgc ggctggcaca tgtctggttg gatgaataca aggagcagta
1081 tttttcctta agacctgacc tgaagacgaa aagctatggc aatatcagtg agcgtgtgga
1141 actgagaaag aagttgggct gtaaatcatt taaatggtat ttggataatg tatacccaga
1201 gatgcagata tctgggtccc acgccaaacc ccaacaaccc atttttgtca atagagggcc
1261 aaaacgaccc aaagtccttc aacgtggaag gctctatcac ctccagacca acaaatgcct
1321 ggtggcccag ggccgcccaa gtcagaaggg aggtctcgtg gtgcttaagg cctgtgacta
1381 cagtgaccca aatcagatct ggatctataa tgaagagcat gaattggttt taaatagtct
1441 cctttgtcta gatatgtcag agactcgctc atcagacccg ccacggctca tgaaatgcca
1501 cgggtcagga ggatcccagc agtggacctt tgggaaaaac aatcggctat accaggtgtc
1561 ggttggacag tgcctgagag cagtggatcc cctgggtcag aagggctctg tcgccatggc
1621 gatctgcgat ggctcctctt cacagcagtg gcatttggaa ggttaaggtg gatgctgtgg
1681 cgggaacgtt gcttcatcag gcgttgcctc cggtgtggag tttggggctt taggaa
//