LOCUS AK298888 917 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ60803 complete cds, highly similar to Homo
sapiens RAB, member RAS oncogene family-like 5 (RABL5), mRNA.
ACCESSION AK298888
VERSION AK298888.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 917)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..917
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2000942"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000493512"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 210..536
/codon_start=1
/note="highly similar to Homo sapiens RAB, member RAS
oncogene family-like 5 (RABL5), mRNA"
/protein_id="BAH12896.1"
/transl_table=1
/translation="MKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIA
HHKPGSGDDKGSLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDRE
EMSIMT"
BASE COUNT 236 a 233 c 224 g 224 t
ORIGIN
1 gtcctgacgc gccgcctccc gtgggctccg gccggctaag ccgcggcgga caactatgct
61 gaaagccaag atcctcttcg tggggccttg cgaggatcct agaatttgag aacccgcatg
121 ttaccagcaa caacaaaggc acgggctgtg aattcgagct atgggactgt ggtggcgatg
181 ctaagtttga gtcctgctgg ccggccctga tgaaggatgc tcatggagtg gtgatcgtct
241 tcaatgctga catcccaagc caccggaagg aaatggagat gtggtattcc tgctttgtcc
301 aacagccgtc cttacaggac acacagtgta tgctaattgc acaccacaaa ccaggctctg
361 gagatgataa aggaagcctg tctttgtcgc cacccttgaa caagctgaag ctggtgcact
421 caaacctgga agatgaccct gaggagatcc ggatggaatt cataaagtat ttaaaaagca
481 taatcaactc catgtctgag agcagagaca gggaggagat gtcaattatg acctagccag
541 ccttcacctg ggactgccac atccccagtg aaatcagcat gtttctcggt gcagatctga
601 aatcacatcc agctcctgat gttttcttct ccctctgact gcagaggaag tgttcctacc
661 tgcaggaagg cacctgtcac acagggcgtt cactcagacc atctgtgctc tgccctgagt
721 tcagttgaga aaatcctatt atcaaatttg gatttcctgg ccccagaact tcccaaagac
781 ctgtaaaatg gagggattta ccacctcaca tatgtccagt taaacagttt gtggacttgt
841 aaccgtcgca gcccaatgat acaacagtag tttaatcacg tgtattggct tgaatgtgat
901 tttcattcct tgattca
//