LOCUS AK298882 1474 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ56226 complete cds, highly similar to Synphilin-1. ACCESSION AK298882 VERSION AK298882.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1474) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1474 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2NE2019028" /clone_lib="NT2NE2" /db_xref="H-InvDB:HIT000493506" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuron after the differentiation of NT2 neuronal precursor cells." /organism="Homo sapiens" CDS 172..1317 /codon_start=1 /note="highly similar to Synphilin-1" /protein_id="BAH12894.1" /transl_table=1 /translation="MKLTLVMTYLIQSHHSRRSQNCAEDVIRKTKTDQNGQLECVRWM VRETEAIAELSCSKDFPSLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQDGNSAVH VASQHGYLGCIQTLVEYGANVTMQNHAGEKPSQSAERQGHTLCSRYLVVVETCMSLAS QVVKLTKQLKEQTVERVTLQNQLQQFLEAQKSEGKSLPSSPSSPSSPASRKSQWKSPD ADDDSVAKSKPGVQEGIQVLGSLSASSRARPKAKDEDSDKILRQLLGKEISENVCTQE KLSLEFQDAQASSRNSKKIPLEKRELKLARLRQLMQRSLSESDTDSNNSEDPKTTPVR KADRPRPQPIVESVESMDSAGFLSASRPPNPWMATAHLPPQRAANQT" BASE COUNT 414 a 377 c 364 g 319 t ORIGIN 1 agtgctgttc tgcgtcccag gctggtccgc gtggatttca gaggggaatg tttctctctt 61 ggccttgtct cttggcgatg actttcatct gcaggtggaa tttataagta tttgaccgta 121 ctcaaaatgt gcaaggaaga ataatggaag cccctgaata ccttgatttg gatgaaattg 181 actttagtga tgacatatct tattcagtca catcactcaa gacgatccca gaactgtgcc 241 gaagatgtga tacgcaaaac gaagacagat cagaatggtc agttggagtg cgtacgctgg 301 atggtgcgcg aaacagaagc cattgcagaa ctgagttgtt ctaaggattt tccaagcctt 361 attcattacg caggttgcta tggccaggaa aagattcttc tgtggcttct tcagtttatg 421 caagaacagg gcatctcgtt ggatgaagta gaccaggatg gcaacagtgc cgttcacgta 481 gcctcacagc atggctacct tggatgcata cagaccttgg ttgaatatgg agcaaatgtc 541 accatgcaga accacgctgg ggaaaagccc tcccagagcg ccgagcggca ggggcacacc 601 ctgtgctcca ggtacctggt ggtggtggag acctgcatgt cgctggcctc tcaagtggtg 661 aagttaacca agcagctaaa ggaacaaaca gtagaacgtg tcacgctgca gaaccaactc 721 caacaatttc tagaagccca gaaatcagag ggcaagtcac tcccttcttc acccagttca 781 ccatcctcac ctgcctccag aaagtcccag tggaaatctc cagatgcaga tgatgattct 841 gtagccaaaa gcaagccagg agtccaagag gggattcagg ttcttggaag cctgtcagcc 901 tccagccggg ctagacccaa agcaaaagat gaagattctg ataaaatctt acgccagtta 961 ttgggaaagg aaatctcaga aaatgtctgc acccaggaaa aactgtcctt ggaattccag 1021 gatgctcagg cttcctctag aaattctaaa aagatcccac tggagaagag ggaactgaag 1081 ttagccaggc tgagacagct gatgcagagg tcactgagtg agtctgacac agactccaac 1141 aactctgagg accccaagac taccccagtg aggaaggctg accgaccaag gccgcagccc 1201 attgtagaaa gcgtagagag tatggacagc gcaggtttcc tttcagcatc aaggcctcca 1261 aatccctgga tggccacagc ccatctccca cctcagagag cagcgaacca gacttagaat 1321 cccagtatcc aggctcaggg agtattcctc caaaccagcc ctctggtgac cctcagcagc 1381 ccagccctga cagtactgct gcccagaaag ttgccacaag tcccaagagt gccctcaagt 1441 ctccatcttc caagcgtagg acatctcaga actt //