LOCUS AK298869 1452 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ51943 complete cds, highly similar to Sorting nexin-17. ACCESSION AK298869 VERSION AK298869.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1452) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1452 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2NE2016887" /clone_lib="NT2NE2" /db_xref="H-InvDB:HIT000493493" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuron after the differentiation of NT2 neuronal precursor cells." /organism="Homo sapiens" CDS 110..1447 /codon_start=1 /note="highly similar to Sorting nexin-17" /protein_id="BAG60989.1" /transl_table=1 /translation="MHFSIPETESRSGDSGGSAYVLRKEYGANVLPAFPPKKLFSLTP AEVEQRREQLEKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQ KVLVNVLTSDQTEDVLEAVAAKLDLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELP YVSVTSLRSQEYKIVLRKSYWDSAYDDDVMENRVGLNLLYAQTVSDIERGWILVTKEQ HRQLKSLQEKVSKKEFLRLAQTLRHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQL RLPGQQLREGSFRVTRMRCWRVTSSVPLPSGSTSSPGRGRGEVRLELAFEYLMSKDRL QWVTITSPQAIMMSICLQSMVDELMVKKSGGSIRKMLRRRVGGTLRRSDSQQAVKSPP LLESPDATRESMVKLSSKLSAVSLRGIGSPSTDASASDVHGNFAFEGIGDEDL" BASE COUNT 328 a 370 c 442 g 312 t ORIGIN 1 aaaaatggcg agtgaggctg cggggactcg ctgagcagcg gagggggagc gtgcagagcc 61 gctgcggccc tcacagtccg gagcccggcc gtgccgtgcc gtagggaaca tgcacttttc 121 cattcccgaa accgagtccc gcagcgggga cagcggcggc tccgcctacg tgcttcggaa 181 ggagtatggg gccaatgtgc ttcctgcatt ccccccaaag aagcttttct ctctgactcc 241 tgctgaggta gaacagagga gagagcagtt agagaagtac atgcaagctg ttcggcaaga 301 cccattgctt gggagcagcg agactttcaa cagtttcctg cgtcgggcac aacaggagac 361 acagcaggtc cccacagagg aagtgtcctt ggaagtgctg ctcagcaacg ggcagaaagt 421 tctggtcaac gtgctaactt cagatcagac tgaggatgtc ctggaggctg tagctgcaaa 481 gctggatctt ccagatgact tgattggata ctttagtcta ttcttagttc gagaaaaaga 541 ggatggagcc ttttcttttg tacggaagtt gcaagagttt gagctgcctt atgtgtctgt 601 caccagcctt cggagtcaag agtataagat tgtgctaagg aagagttatt gggactctgc 661 ctatgatgac gatgtcatgg agaaccgggt tggcctgaac ctgctttatg ctcagacggt 721 atcagatatt gagcgtgggt ggatcttggt caccaaggaa cagcaccggc aactcaaatc 781 tctgcaagag aaagtctcca agaaggagtt cctgagactg gcccagacgc tgcggcacta 841 tggctacttg cgctttgatg cctgtgtggc tgacttccca gaaaaggact gtcctgtggt 901 ggtgagcgcg ggcaacagtg agctcagcct gcagctccgc ctgcctggcc agcaactccg 961 agaaggctcc ttccgggtca cccgcatgcg atgctggcgg gtcacctcct ctgtaccatt 1021 gcccagtgga agcacgagca gcccaggccg gggccggggt gaggtgcgcc tggaactggc 1081 ttttgaatac ctcatgagca aggaccggct acagtgggtc accatcacta gcccccaggc 1141 tatcatgatg agcatctgct tgcagtccat ggttgatgaa ctgatggtga agaaatctgg 1201 cggcagtatc aggaagatgc tgcgccggcg ggtgggtggt actctgagac gctcagacag 1261 ccagcaagca gtgaagtccc caccactgct tgagtcacct gatgccaccc gggagtctat 1321 ggtcaaactc tcaagtaagc tgagtgccgt gagcttgcgg ggaattggca gtcccagcac 1381 agatgccagt gccagtgatg tccacggcaa tttcgccttc gagggcattg gagatgagga 1441 tctgtaatct cc //