LOCUS AK298832 1518 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ52724 complete cds, highly similar to Gamma-secretase subunit APH-1A. ACCESSION AK298832 VERSION AK298832.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1518) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1518 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2NE2010507" /clone_lib="NT2NE2" /db_xref="H-InvDB:HIT000493456" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuron after the differentiation of NT2 neuronal precursor cells." /organism="Homo sapiens" CDS 207..794 /codon_start=1 /note="highly similar to Gamma-secretase subunit APH-1A" /protein_id="BAG60962.1" /transl_table=1 /translation="MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGRCSALP TTSCLISGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHT FWGVVFFDACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPIYAVTVSMGLWAFI TAGGSLRSIQRSLLCRRQEDSRVMVYSALRIPPED" BASE COUNT 257 a 399 c 428 g 434 t ORIGIN 1 ctcttcggct tccgtagagg aagtggcgcg gaccttcatt tggggtttcg gttccccccc 61 ttccccttcc ccggggtctg ggggtgacat tgcaccgcgc ccctcgtggg gtcgcgttgc 121 caccccacgc ggactcccca gctggcgcgc ccctcccatt tgcctgtcct ggtcaggccc 181 ccacccccct tcccacctga ccagccatgg gggctgcggt gtttttcggc tgcactttcg 241 tcgcgttcgg cccggccttc gcgcttttct tgatcactgt ggctggggac ccgcttcgcg 301 ttatcatcct ggtcgcaggg aggtgttccg ctttgcctac tacaagctgc ttaatttctg 361 gtctctcctt cggtatcatc agtggtgtct tctctgttat caatattttg gctgatgcac 421 ttgggccagg tgtggttggg atccatggag actcacccta ttacttcctg acttcagcct 481 ttctgacagc agccattatc ctgctccata ccttttgggg agttgtgttc tttgatgcct 541 gtgagaggag acggtactgg gctttgggcc tggtggttgg gagtcaccta ctgacatcgg 601 gactgacatt cctgaacccc tggtatgagg ccagcctgct gcccatctat gcagtcactg 661 tttccatggg gctctgggcc ttcatcacag ctggagggtc cctccgaagt attcagcgca 721 gcctcttgtg ccgacggcag gaggacagtc gggtgatggt gtattctgcc ctgcgcatcc 781 cacccgagga ctgagggaac ctagggggga cccctgggcc tggggtgccc tcctgatgtc 841 ctcgccctgt atttctccat ctccagttct gggcagtgca ggttgccaag aaaagggacc 901 tagtttagcc attgccctgg agatgaaatt aatggaggct caaggataga tgagctctga 961 gtttctcagt actccctcaa gactggacat cttggtcttt ttctcaggcc tgagggggaa 1021 ccatttttgg tgtgataaat accctaaact gccttttttt cttttttgag gtggggggag 1081 ggaggaggta tattggaact cttctaacct ccttgggcta tattttctct cctcgagttg 1141 ctcctcatgg ctgggctcat ttcggtccct ttctccttgg tcccagacct tgggggaaag 1201 gaaggaagtg catgtttggg aactggcatt actggaacta atggttttaa cctccttaac 1261 caccagcatc cctcctctcc ccaaggtgaa gtggagggtg ctgtggtgag ctggccactc 1321 cagagctgca gtgccactgg aggagtcaga ctaccatgac atcgtaggga aggaggggag 1381 atttttttgt agtttttaat tggggtgtgg gaggggcggg gaggttttct ataaactgta 1441 tcattttctg ctgagggtgg agtgtcccat ccttttaatc aaggtgattg tgattttgac 1501 taataaaaaa gaatttgt //