LOCUS AK298826 2295 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59213 complete cds, highly similar to Nuclear
valosin-containing protein-like.
ACCESSION AK298826
VERSION AK298826.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2295)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2295
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2NE2009164"
/clone_lib="NT2NE2"
/db_xref="H-InvDB:HIT000493450"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuron after the differentiation of
NT2 neuronal precursor cells."
/organism="Homo sapiens"
CDS 259..2028
/codon_start=1
/note="highly similar to Nuclear valosin-containing
protein-like"
/protein_id="BAG60956.1"
/transl_table=1
/translation="MEDYPDPQSANHMNSSLLSLYRKGNPDSVSNTPEMEQRETTSST
PRISSKTGSIPLKTPAKDSEGGWFIDKTPSVKKDSFFLDLSCEKSNPKKPITEIQDSK
DSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKARGLEFQISNVKFED
VGGNDMTLKEVCKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDL
PILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMER
RIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASR
ERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQK
KNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDF
IVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDPFKALGLVT
PAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKN
SAPCVIFFDEVDALCPRRSDREI"
BASE COUNT 709 a 475 c 567 g 544 t
ORIGIN
1 gaaagaccga cgcgatgaag cccagacctg cagggttcgt ggataataaa ctcaagcagc
61 gagtcatcca gtatagacta tggtcgaaga aaaagaaatg cttttaggat tcaggtagaa
121 aaagtattta gcataattag tagtgagaag gaacttaaga atttaacaga attagaagat
181 gaacatttgg caaaaagggc aagacaaggt gaagaggata atgagtatac tgaaagctat
241 tctgatgatg attcaagtat ggaagactac ccagatccac agtcagcaaa tcacatgaac
301 agttccctgc tgtctttata tcggaaagga aatcctgatt ctgtttcaaa tactcctgag
361 atggagcaaa gagaaaccac ctcttcaaca ccacgaataa gttccaaaac aggctccatt
421 cccttgaaga cccctgccaa agattctgaa ggaggatggt ttattgacaa aaccccaagt
481 gtaaagaaag acagtttttt cttggacctg tcatgtgaga aaagtaatcc taagaagcca
541 ataactgaga tacaggattc aaaagattct tctcttttgg agagtgatat gaaacggaaa
601 ggcaagctaa agaataaagg aagcaaaagg aagaaagaag atcttcagga agtagatgga
661 gaaattgaag ctgtcctaca aaagaaagct aaagccaggg ggttagaatt ccagatctcc
721 aacgtgaagt ttgaagatgt gggaggcaat gatatgacat taaaagaggt ctgcaagatg
781 ctcatacaca tgcgtcaccc ggaggtgtac caccacctgg gcgtcgtgcc ccctcgtgga
841 gttctccttc atggaccacc aggctgtggg aagacattac ttgcacatgc aattgctggg
901 gaacttgacc tgccaatttt gaaagtggct gctccagaga ttgtgtctgg agtatccgga
961 gagtctgagc agaagctgag agaactattt gagcaagctg tgtcaaatgc accatgtatc
1021 attttcattg atgaaattga tgctattacc cccaaaagag aagtggcttc aaaagatatg
1081 gaacgaagaa ttgtagccca actcctaacc tgcatggatg atctgaataa tgtggctgct
1141 acagcccggg tcctagttat tggagctact aatcgaccag actcgttaga ccctgctttg
1201 agacgtgcgg gaaggttcga ccgagaaata tgcctaggta tcccagatga agcatccagg
1261 gaaagaatac ttcaaacatt gtgcagaaaa ctgaggcttc ctcaagcttt tgatttctgt
1321 cacttagcac acctaactcc aggctttgtt ggtgctgatc tcatggcact gtgccgagag
1381 gcagcaatgt gtgcagtcaa tagagtctta atgaagctac aggaacagca gaagaaaaat
1441 cctgaaatgg aagatttgcc atctaaagga gtccaggagg aaaggctggg aactgagccc
1501 acttctgaaa cacaggatga attacaaagg ctgctggggt tgctaagaga ccaagatccc
1561 ctctcagagg agcagatgca aggactgtgc attgaactga atgatttcat tgttgctcta
1621 tcctcagtcc aaccctctgc caaaagggaa ggctttgtca ctgtccctaa tgtgacatgg
1681 gcagatattg gtgccctgga agacattaga gaggagctca ccatggcaat attggcacca
1741 gtacgcaacc cagacccgtt caaagctctt ggattggtga ctccagctgg ggtcctcctt
1801 gctggtcctc ctggctgtgg gaagactctg ctggcgaagg ctgttgcaaa tgagtccgga
1861 ctaaatttta tatctgtcaa gggccccgaa ttactaaaca tgtatgttgg tgagagtgaa
1921 cgtgctgtgc gacaagtttt tcaacgagcc aagaactcag caccctgtgt gatattcttt
1981 gatgaagtgg atgctttatg tcctcgaaga tcagaccgag agatataatt gaccctgcaa
2041 tcctgcgccc gggccgcctg gacaaaacac tgtttgtggg tttaccgccc cctgcagatc
2101 gccttgccat cttaaaaact atcacaaaaa atggtaccaa accaccactg gatgcagatg
2161 taaatttgga agcaattgct ggtgaccttc gctgtgattg ctatacgggc gcagatctct
2221 ctgctttggt acgagaagct tctatctgtg ccctgagaca ggaaatggca agacagaaga
2281 gtggagatga aaaag
//