LOCUS AK298819 1575 bp mRNA linear HUM 31-JUL-2008 DEFINITION Homo sapiens cDNA FLJ53854 complete cds, highly similar to Vacuolar ATP synthase subunit B, brain isoform (EC 3.6.3.14). ACCESSION AK298819 VERSION AK298819.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1575) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1575 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2NE2008295" /clone_lib="NT2NE2" /db_xref="H-InvDB:HIT000493443" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuron after the differentiation of NT2 neuronal precursor cells." /organism="Homo sapiens" CDS 363..1199 /codon_start=1 /note="highly similar to Vacuolar ATP synthase subunit B, brain isoform (EC 3.6.3.14)" /protein_id="BAG60951.1" /transl_table=1 /translation="MGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRL ALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIY ERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPIN VLPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLY LEFLQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSA KH" BASE COUNT 404 a 357 c 378 g 436 t ORIGIN 1 agaggagaca agatggcgct gcgggcgatg cgggggattg tcaacggggc cgcacccgag 61 ctacccgtgc ccaccggtgg gccggcggtg ggagctcggg agcaggcgct ggcagtcagt 121 cggaactacc tctcccagcc tcgcctcaca tacaagacag tatctggagt caatggtcca 181 ccagtgatct tagatcatgt taagtttccc aggtatgctg aaattgtcca tttgacctta 241 ccggatggca caaagagaag tgggcaagtt ctggaagtta gtggttccaa ggcagtagtt 301 caggtatttg aagggacttc aggtatagat gctaagaaaa ttttgcaatt gtatttgctg 361 ctatgggtgt aaacatggaa actgcccggt tcttcaaatc tgactttgaa gaaaatggct 421 caatggacaa tgtctgcctc tttttgaact tggctaatga cccaaccatt gagcgaatta 481 tcactcctcg cctggctcta accacagctg aatttctggc gtaccaatgt gagaaacatg 541 tattggttat tctaacagac atgagttctt atgctgaagc acttcgagag gtttcagcag 601 ccagggaaga ggtacctggt cgacgaggtt ttccaggtta catgtataca gatttagcca 661 cgatatatga acgcgctggg cgagtggaag ggagaaacgg ctcgattact caaatcccta 721 ttctaaccat gcccaatgat gatatcactc accccatccc agacttgact ggctacatta 781 cagaggggca gatctatgtg gacagacagc tgcacaacag acagatttat ccacctatca 841 atgtgctgcc ctcactatca cggttaatga agtctgctat tggagaaggg atgaccagga 901 aggatcatgc cgatgtatct aaccagctat atgcgtgcta tgctattgga aaggatgtgc 961 aagccatgaa agctgtcgtt ggagaagaag cccttacctc agatgatctt ctctacttgg 1021 aatttctgca gaagtttgag aggaacttca ttgctcaggg tccttacgaa aatcgcactg 1081 tctttgagac tttggacatt ggctggcagc tactccgaat cttccccaaa gaaatgctga 1141 agagaatccc tcagagcacc ctcagcgaat tttaccctcg agactctgca aagcattagc 1201 tgctgcttct gcattgctcc gcgctcttgt gaaatactgg ttctgttttc tttattcctt 1261 ttgcactctc ggttcccacc tttgtgttgg agtttaccat gttaccctgt aattaaaaac 1321 aaagaatagg taacatattg tgccagtgtt gcaacgtttt aaactgctaa cagaccttaa 1381 aatatccccc tacctgggtc ctcagtgcta tgtttaaagt gctgcaggga tggagtggcg 1441 ttttcttatt gctgtatgta ttgtacatag tggagtagtt agttacctga taacagtctt 1501 gttatttggg tctcttagac cttacctctc aactccctca agagtaccag tctctgaagt 1561 tataatgctt tggtc //