LOCUS AK298812 1089 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ59957 complete cds, highly similar to
Translin.
ACCESSION AK298812
VERSION AK298812.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1089)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1089
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2NE2007284"
/clone_lib="NT2NE2"
/db_xref="H-InvDB:HIT000493436"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuron after the differentiation of
NT2 neuronal precursor cells."
/organism="Homo sapiens"
CDS 97..681
/codon_start=1
/note="highly similar to Translin"
/protein_id="BAH12875.1"
/transl_table=1
/translation="MSVSEIFVELQGFLAAEQDIPKRCLKAREHFGTVKTHLTSLKTK
FPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHLD
VEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKR
YDGLKYDVKKVEEVVYDLSIRGFNKETAAACVEK"
BASE COUNT 257 a 227 c 274 g 331 t
ORIGIN
1 agcggcggcc gttgcgattg attgcgctgg ttgcctgcgg cgtccacttc cttggccgcc
61 cttgctacac tggctgattg ttgtgcagcc ggcgccatgt ctgtgagcga gatcttcgtg
121 gagctgcagg gctttttggc tgccgagcag gacattccaa agaggtgttt gaaagctcga
181 gaacattttg gtacagtaaa aacacatcta acatctttga agaccaaatt tcctgctgaa
241 cagtattaca gatttcatga gcactggagg tttgtgttgc agcgcttggt cttcttggca
301 gcatttgttg tgtatttgga aacagaaaca ctagtgactc gagaagcagt tacagaaatt
361 cttggcattg agccagatcg ggagaaagga tttcatctgg atgtagaaga ttatctctca
421 ggagttctaa ttcttgccag tgaactgtcg aggctgtctg tcaacagcgt gactgctgga
481 gactactccc gacccctcca catctccacc ttcatcaatg agctggattc cggttttcgc
541 cttctcaacc tgaaaaatga ctccctgagg aagcgctacg acggattgaa atatgacgtg
601 aagaaagtag aggaagtggt ctatgatctc tccatccggg gctttaataa ggagacggca
661 gcagcttgtg ttgaaaaata ggaggctctc cttgctcctg gccttgctga cctcagcggt
721 tgccaggaag gggtgagcac agagtgcctc ttacggtagt taggatgctc agttgctaaa
781 cactgcgctt tattttctta accagttgtg gtgtgagtat cagaattgaa acactttttt
841 gggggtaaaa aatatagcct ttacatggac agaatttttt ttgttgtttc agtgaatatg
901 cctgtaattc agtgtatttc agttccgtca gaaagtgtaa atgttagttt cttggtaaag
961 tccttttctt gcttaccttg actgttgatg tactgattga gaagttcatt gtctcgtttg
1021 tgattcttcc agatgtgatg cttgatattt tctatatgcg agttagccat ccacacccag
1081 gcatagcct
//