LOCUS AK298799 1192 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ50834 complete cds, highly similar to Homo
sapiens scotin (SCOTIN), mRNA.
ACCESSION AK298799
VERSION AK298799.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1192)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1192
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2NE2004380"
/clone_lib="NT2NE2"
/db_xref="H-InvDB:HIT000493423"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuron after the differentiation of
NT2 neuronal precursor cells."
/organism="Homo sapiens"
CDS 145..489
/codon_start=1
/note="highly similar to Homo sapiens scotin (SCOTIN),
mRNA"
/protein_id="BAG60934.1"
/transl_table=1
/translation="MGFGATLAVGLTIFVLSVVTIIICFTCSCCCLYKTCRRPRPVVT
TTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPPY
NPAYMDAPKAAL"
BASE COUNT 209 a 359 c 341 g 283 t
ORIGIN
1 gtgcttcctg tggctgacgt catctggagg agatttgctt tctttttctc caaaagggga
61 ggaaattgaa actgagtggc ccacgatggg aagaggggaa agcccagggg tacaggaggc
121 ctctgggtga aggcagaggc taacatgggg ttcggagcga ccttggccgt tggcctgacc
181 atctttgtgc tgtctgtcgt cactatcatc atctgcttca cctgctcctg ctgctgcctt
241 tacaagacgt gccgccgacc acgtccggtt gtcaccacca ccacatccac cactgtggtg
301 catgcccctt atcctcagcc tccaagtgtg ccgcccagct accctggacc aagctaccag
361 ggctaccaca ccatgccgcc tcagccaggg atgccagcag caccctaccc aatgcagtac
421 ccaccacctt acccagccca gcctccttac aacccggcct acatggatgc cccgaaggcg
481 gccctctgag cattccctgg cctctctggc tgccacttgg ttatgttgtg tgtgtgcgtg
541 agtggtgtgc aggcgcggtt ccttacgccc catgtgtgct gtgtgtgtcc aggcacggtt
601 ccttacgccc catgtgtgct gtgtgtgtcc tgcctgtata tgtggcttcc tctgatgctg
661 acaaggtggg gaacaatcct tgccagagtg ggctgggacc agactttgtt ctcttcctca
721 cctgaaatta tgcttcctaa aatctcaagc caaactcaaa gaatggggtg gtggggggca
781 ccctgtgagg tggcccctga gaggtggggg cctctccagg gcacatctgg agttcttctc
841 cagcttaccc tagggtgacc aagtagggcc tgtcacacca gggtggcgca gctttctgtg
901 tgatgcagat gtgtcctggt ttcggcagcg tagccagctg ctgcttgagg ccatggctcg
961 tccccggagt tgggggtacc cgttgcagag ccagggacat gatgcaggcg aagcttggga
1021 tctggccaag ttggactttg atcctttggg cagatgtccc attgctccct ggagcctgtc
1081 atgcctgttg gggatcaggc agcctcctga tgccagaaca cctcaggcag agccctactc
1141 agctgtacct gtctgcctgg actgtcccct gtccccgcat ctcccctggg ac
//