LOCUS AK298795 1940 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ56128 complete cds, highly similar to CGTHBA
protein.
ACCESSION AK298795
VERSION AK298795.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1940)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1940
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2NE2004094"
/clone_lib="NT2NE2"
/db_xref="H-InvDB:HIT000493419"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuron after the differentiation of
NT2 neuronal precursor cells."
/organism="Homo sapiens"
CDS 228..1628
/codon_start=1
/note="highly similar to CGTHBA protein"
/protein_id="BAH12872.1"
/transl_table=1
/translation="MCGQKFELKIDNVRFVGHPTLLQHALGQANADPSVINCLHNLSR
RIATVLQHEERRCQYLTREAKLILALQDEVSAMADGNEGPQSPFHHILPKCKLARDLK
EAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAASSLIPPEAIERSLKAIRPYHALLL
LSDEKSLLGELPIDCSPALVRVIKTTSAVKNLQQLAQDADLALLQVFQLAAHLVYWGK
AIIIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSHDLPSVLAKFSLPVSLSEFRN
PLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRPREDDVPFTARVGGR
SLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASLSEHER
AAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQLLMLFDKFRSVLVV
TTHEDPVIAVFQALLP"
BASE COUNT 395 a 637 c 532 g 376 t
ORIGIN
1 acaacaccag ccccatcagc gtgattctgg tgagctcggg gagcaggggc aataagctgc
61 tgttcaggta ccccttccag agaagccagg agcacccggc gtcccagaca agtaagccgc
121 gtagcagata cgctgccagc aacacgggcg accatgctga tgagcaggac ggcgattcca
181 ggttttcaga tgttattctg gcaacaattt tggcaaccaa gtctgaaatg tgtggccaaa
241 aatttgaact gaagattgat aatgtgcgat ttgttgggca cccaacactg ctacagcatg
301 ctctggggca ggccaacgca gacccgtcag tgataaactg tctgcataac ctgtcccgtc
361 gtatcgccac cgtgctgcag cacgaggagc gccgctgcca gtacctcacc cgggaggcca
421 agctgatcct ggcgctccag gatgaggtgt ccgccatggc tgatggaaat gaaggtcctc
481 agtccccatt ccatcacatc ctgcccaagt gcaagctggc cagggacctc aaggaagctt
541 atgacagcct gtgcacgtcg ggcgtagttc ggcttcacat caacagctgg ctggaggtga
601 gcttctgcct gccccacaag atccactatg cggcctccag tctgatcccc ccagaggcca
661 tcgaacggag cctgaaagcc atccgcccct accatgccct gctgctgctc agtgatgaga
721 agtccttgct gggtgagctt cctattgact gctcccctgc cctagtgcgg gtgatcaaga
781 ccacatctgc tgtgaagaac ctgcagcagc tagcccaaga tgcggacctg gccttgctgc
841 aggttttcca gcttgcagct catctggtgt actggggcaa ggccatcatc atctacccgc
901 tgtgtgagaa caacgtctac atgctgtctc ccaatgccag cgtatgtctg tactccccgc
961 tggccgagca gttctcccac cagttcccat ctcatgacct gccgtccgtt cttgccaagt
1021 tctccttgcc ggtctccttg tcagaattta ggaatcccct ggcccccgct gtgcaggaga
1081 cccagctcat ccagatggtg gtgtggatgc tgcagcgccg gcttctcatc cagctgcaca
1141 cctatgtctg cctgatggcc tcacccagcg aggaggagcc ccgtccgcga gaggacgacg
1201 tccccttcac tgcccgggtc ggcggtcgca gcctcagcac gcccaacgcc ctcagctttg
1261 gctccccaac cagcagcgat gacatgaccc tcaccagccc cagcatggac aactccagcg
1321 cagagctact tcccagcggg gactcgccac tgaaccagag gatgacggag aacctgctgg
1381 ccagcctgtc ggagcatgaa cgcgcagcca tcctcagtgt acccgcagcc cagaaccctg
1441 aggacctccg catgtttgcc aggctccttc actacttccg cggccgccac cacctggagg
1501 agattatgta caacgagaac acgcggcgct cccagctgct catgctgttt gacaagttcc
1561 gcagcgtgct ggtggtgacc acccacgagg accctgtcat tgccgtcttc caggctctgc
1621 tcccctgagc ccaggcggag ggcggaaggc tgctggggtg cgcaggtttg gaaaggcccc
1681 ttggattcct ggctggggac aatgatgacc tggaccctgg ccagaagagc cctggccctc
1741 cagcaaggca gcacctgctc tgatgcacct gtgcacccct ggccctccca gccacctggg
1801 agcccgaagc ttagcctgta ggtggccaag ccagtcccta ctcttgggct gcggccacgt
1861 gaggctccgc atcagcagcc aggggcgagc actagtggac aaagccagca aatgcggcgt
1921 tcctgtgagc agataccctc
//