LOCUS AK298787 1775 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55478 complete cds, highly similar to
Dachshund homolog 2.
ACCESSION AK298787
VERSION AK298787.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1775)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1775
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2NE2002760"
/clone_lib="NT2NE2"
/db_xref="H-InvDB:HIT000493411"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuron after the differentiation of
NT2 neuronal precursor cells."
/organism="Homo sapiens"
CDS 58..1356
/codon_start=1
/note="highly similar to Dachshund homolog 2"
/protein_id="BAG60925.1"
/transl_table=1
/translation="MTRKQAVNSSRPGRPPKRSLGVLQENARLLTHAVPGLLSPGLIT
PTGITAAAMAEAMKLQKMKLMAMNTLQGNGSQNGTESEPDDLNSNTGGSESSWDKDKM
QSPFAAPGPQHGIAHAALAGQPGIGGAPTLNPLQQNHLLTNRLDLPFMMMPHPLLPVS
LPPASVAMAMNQMNHLNTIANMAAAAQIHSPLSRAGTSVIKERIPESPSPAPSLEENH
RPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQIPIMKSPLDKIQLTPGQALPAGFP
GPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQIQQEKKELRLELYREREIRENL
ERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRREQVEQALKQATTSDSGLRM
LKDTGIPDIEIENNGTPHDSAAMQGGNYYCLEMAQQLYSA"
BASE COUNT 539 a 393 c 385 g 458 t
ORIGIN
1 atatgcaccc aaagcactct tagttgcagc caaagcagtg gaagaaggaa gaggcaaatg
61 acaagaaaac aagctgttaa cagttcaaga cccggcaggc cccctaagcg ttctttggga
121 gtgttgcagg aaaatgcccg ccttctgacc catgcagtcc caggcctctt atcgccagga
181 cttatcactc cgacaggtat aacagctgca gcgatggctg aggcgatgaa acttcagaag
241 atgaagctta tggctatgaa cactcttcag ggaaatggaa gccaaaatgg gaccgaatca
301 gagcctgatg atcttaattc taacacaggt ggaagtgaat cctcctggga taaagataag
361 atgcagtctc catttgctgc acctggaccc caacatggaa ttgctcatgc agccctagct
421 ggccagccag gcattggggg tgctccaacc ctcaatccac tgcagcagaa ccacctgcta
481 accaatagac tggatctgcc atttatgatg atgcctcatc ccctacttcc agtcagctta
541 cctcctgcat cagttgccat ggcaatgaat cagatgaacc atctcaatac tattgccaac
601 atggctgctg cagcacagat tcacagtcca ctctccagag ctggtacctc tgttataaag
661 gagcggatcc cagagagtcc ttctcctgct ccttctctag aagagaatca tcgtcctggg
721 agccagacct cttcccacac cagcagcagt gtgtccagct ctccctctca gatggatcat
781 catttggaaa gaatggaaga ggtaccagtt caaattccaa taatgaagtc acccttggac
841 aagatacagc tgactcctgg gcaggcattg cccgctggat tccctggacc attcattttt
901 gctgatagtc tgtcctccgt ggagactctg ttgaccaaca ttcagggtct gctgaaagtt
961 gctttggata atgctcgcat ccaggagaag cagattcaac aagaaaagaa ggagctgcga
1021 ctggagctct atagagagag agaaattaga gaaaaccttg aaagacaact tgcagttgag
1081 cttcaaagca gaactactat gcaaaagcgc ctgaagaagg agaaaaaaac caagagaaaa
1141 ttgcaggaag ccttggaatt tgaatcaaag cgccgggagc aagtggagca ggcacttaag
1201 caagccacca ctagtgacag tggcctgagg atgttaaaag atactggaat tccagatatt
1261 gaaatagaaa acaatgggac tcctcatgat agtgctgcta tgcaaggagg taactattac
1321 tgtttagaaa tggcacaaca gttgtattca gcctgaaagg tcctcgctgg ctttacataa
1381 atgaagatgc ttgtgattcc agtttatctc tgaaactatt caacatggag ttatttcagt
1441 tttgtttatc agcaaagctt tgtttactga aggagctatt taatctatgt tacattaaaa
1501 aagaaacgcg tgtacatttt aaaagcaatg atgtaaactt tgttcttgca ttagactgac
1561 cagtttaaaa atatgaacta aatcctaatg gctaaagtaa cttgaccata tttgatgctt
1621 ttctatgctc atttcaactt ggctttttgt cttttaaatt tttaaaaaat gcagtagtgt
1681 gttagagact agaaagttat atgtatggtt tccctgttct actatacata acgttaaagt
1741 acaccttctt tgttaaaaat gtacttgcta aactt
//