LOCUS AK298775 2826 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59631 complete cds, highly similar to Homo
sapiens myotubularin related protein 11 (MTMR11), mRNA.
ACCESSION AK298775
VERSION AK298775.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2826)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2826
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2NE2000975"
/clone_lib="NT2NE2"
/db_xref="H-InvDB:HIT000493399"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuron after the differentiation of
NT2 neuronal precursor cells."
/organism="Homo sapiens"
CDS 221..2350
/codon_start=1
/note="highly similar to Homo sapiens myotubularin
related protein 11 (MTMR11), mRNA"
/protein_id="BAG60917.1"
/transl_table=1
/translation="MWWGGRGQSFNIAPQKEEPEMGSVQENRMPEPRSRQPSSCLASR
CLPGEQILAWAPGVRKGLEPELSGTLICTNFRVTFQPCGWQRNQDTPLNSEYDFALVN
IGRLEAVSGLSRVQLLRPGSLHKFIPEEILIHGRDFRLLRVGFEAGGLEPQAFQVTMA
IVQAGAQSNQAQQYSGITLSKAGQGSGSRKPPIPLMETAEDWETERKKQAARGWRVST
VNERFDVATSLPRYFWVPNRILDSEVRRAFGHFHQGRGPRLSWHHPGGSDLLRCGGFY
TASDPNKEDIRAVELMLQAGHSDVVLVDTMDELPSLADVQLAHLRLRALCLPDSSVAE
DKWLSALEGTRWLDYVRACLRKASDISVLVTSRVRSVILQERGDRDLNGLLSSLVQLL
SAPEARTLFGFQSLVQREWVAAGHPFLTRLGGTGASEEAPVFLLFLDCVWQLLQQFPA
DFEFSEFFLLALHDSVRVPDTLTFLRNTPWERGKQSGQLNSYTQVYTPGYSQPPAGNS
FNLQLSVWDWDLRYSNAQILQFQNPGYDPEHCPDSWLPRPQPSFMVPGPPSSVWLFSR
GALTPLNQLCPWRDSPSLLAVSSRWLPRPAISSESLADQEWGLPSHWGACPLPPGLLL
PGYLGPQIRLWRRCYLRGRPEVQMGLSAPTISGLQDELSHLQELLRKWTPRISPEDHS
KKRDPHTILNPTEIAGILKGRAEGDLG"
BASE COUNT 617 a 778 c 712 g 719 t
ORIGIN
1 agtttccgag gagacttctc aggctgggct ggacacacct ttccaaggac ccccaaactc
61 tgctccgtgc acgtcaaatg ctcctttccc ttgtgtccaa ccccctaccc ctctccctaa
121 cacccctctt ctcaacaaga ctcagcctct ccccgaggtg ggtgagcatc cttgaggttt
181 cccaccctta actgctgtgt ccccggatgg agccagagaa atgtggtggg ggggccgggg
241 ccagagtttc aacattgccc cccagaagga ggagccagag atggggtctg tccaggaaaa
301 taggatgccg gagcccagga gtcgtcagcc tagcagttgc ctggcctcca gatgcctccc
361 aggggagcag atcctagcat gggccccagg ggtgaggaag ggcctggaac cagaattgtc
421 tggaaccctg atctgtacca actttagggt caccttccag ccctgtggat ggcagcggaa
481 tcaggacact cccttgaaca gtgaatacga ttttgccctg gtcaacattg gacgattaga
541 ggctgtgagc ggcttgtccc gagtccagct cctccgtcca gggtccctgc ataaatttat
601 ccctgaggag attctgattc atggccgaga cttccggctg ctcagagttg gttttgaggc
661 tggaggccta gagcctcagg cttttcaggt gaccatggcc attgtccaag ccggagctca
721 gagcaatcaa gcccaacagt attcggggat aaccctgagc aaggctggcc agggttctgg
781 ctccagaaaa ccaccaattc ctctcatgga gacagcggaa gactgggaga ctgagcggaa
841 gaagcaggca gccagaggct ggagggtcag cacggtcaac gagaggttcg acgtagccac
901 cagcctcccc cgttacttct gggtccctaa ccgaattctg gacagtgagg tcaggagagc
961 atttggccac tttcatcagg gccgtggacc gcgcttgtcc tggcatcacc ctgggggcag
1021 tgatcttctc cgctgtggag gcttctatac agccagtgac cctaacaagg aggatatcag
1081 agcagtggag ttgatgctcc aggctgggca ttcagatgtt gtcctggtag acactatgga
1141 tgagctgccc agccttgcag atgtccaact tgcccacctg aggctgaggg ccctctgcct
1201 gcctgattca tctgtagctg aggataaatg gctttcagcc ctggaaggaa cacgatggct
1261 ggactatgtc agggcttgtc ttcgaaaggc cagtgacatt tcagtattag tgacatccag
1321 ggttcgttct gtaatacttc aagagcgcgg tgatcgtgat ctcaatggcc tcctctcttc
1381 actcgtccag ctgctttcag cccccgaagc ccgaacactg tttggcttcc aatcactagt
1441 acagcgagag tgggtggcag ctggacatcc cttcctgact cggcttgggg gaactggggc
1501 cagtgaagag gctccggtgt ttctcctctt ccttgattgt gtctggcagc tcctccagca
1561 gtttccagct gattttgaat tctctgagtt tttccttctt gctcttcatg acagtgtcag
1621 ggttcctgac acccttacct tcctgagaaa taccccctgg gagcgcggaa agcagagcgg
1681 acagttaaac tcctatacac aagtctacac cccaggatac tcccagcctc cagctgggaa
1741 ctcttttaac ctgcagctgt ctgtctggga ctgggattta cgttatagca atgcacagat
1801 actacaattc cagaatcctg gctatgaccc agaacactgt ccagattcct ggctccctag
1861 accacagcca agcttcatgg ttcctggacc ccccagttct gtgtggctct tctctagagg
1921 agcattgacc cccctgaatc agctctgtcc ttggcgggac agtccttccc tgctggcagt
1981 ctcttctcgt tggctccctc gacctgctat ctcctctgaa agcctggctg accaggaatg
2041 gggtctcccc tcacattggg gagcttgccc tttacctccg gggctgctgc tgcctgggta
2101 tctgggaccc cagatcaggc tctggagacg ctgctacctg aggggaaggc ctgaggtcca
2161 gatgggcctc tcagctccca caatctctgg cctccaggat gagctatccc atcttcagga
2221 gttattacgg aaatggacac caagaatatc tcctgaggat cactccaaga aaagagatcc
2281 acataccatt ctcaatccca ctgaaattgc tggcattctc aaaggcaggg cagaggggga
2341 tctggggtag aggagggttc tgtctaatct tttttttttt ttttgtatct gcacttgcag
2401 cctcagcttt cacacttcag cccttaagtt cactaagaag gtctgagttt ctgctgcaga
2461 tagtggtgtt aactgctcca actcttgtct tgcttagttt ctacaaatat ttttgcttct
2521 tgtcatttga aggattaaga aacaaaaaca atccagaaat tgatcggttt ttttaggcca
2581 atcccatccc ctctggataa ccagatgtta aatcatgaga tcagagatgc tgttcatcag
2641 tcccaacaag atggcctaga aatcgcattc tcacctcgcc ttgctgctgc tttaattcca
2701 agttctattt cttcccttat agttttctat gggaatgagg ctgatacagg aaacacccta
2761 tctcctctgt atttttgtag tggaatttct atttaagggg ctcattaaag catagtattt
2821 atacac
//