LOCUS AK298750 1653 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ51278 complete cds, highly similar to Homo
sapiens pentatricopeptide repeat domain 2 (PTCD2), mRNA.
ACCESSION AK298750
VERSION AK298750.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1653)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1653
/cell_type="normal neural progenitor cells (NHNP5958)"
/clone="NHNPC2002491"
/clone_lib="NHNPC2"
/db_xref="H-InvDB:HIT000493374"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, normal neural progenitor cells"
/organism="Homo sapiens"
CDS 8..847
/codon_start=1
/note="highly similar to Homo sapiens pentatricopeptide
repeat domain 2 (PTCD2), mRNA"
/protein_id="BAH12866.1"
/transl_table=1
/translation="MVRDSMAAAFRPSNRVLLQALQILVYPGVGGSGPVSCRCPLGAK
RYLLTDNVVKLKEFQQKKVAVACNLSGTKGALQVLIEMKNQDVKFTKDTYVLAFAICY
KLNSPESFKICTTLREEALLKGEILSRRASCFAVALALNQNEMAKAVSIFSQIMNPES
IACINLNIIIHIQSNMLENLIKTLKNAAEGNLSKFVKRHVFSEEVLAKVREKVKDVPA
LVAKFDEIYGTLHITGQVTTDSLDAVLCHTPRDRKSHTLLLNKRMVSRRTFQPLSQSL
LAE"
BASE COUNT 473 a 347 c 354 g 479 t
ORIGIN
1 agttggtatg gtccgagaca gtatggctgc tgcatttcgg ccctcgaatc gagttctcct
61 gcaggcgctg cagattttgg tgtatcctgg ggtgggaggc tccggccctg tcagctgccg
121 ctgccctctc ggagctaaaa gatacctact tacagataat gtggtgaaat taaaagaatt
181 tcaacaaaag aaagtggctg ttgcatgtaa tctttctggc actaaaggtg ctttgcaagt
241 attgatagag atgaaaaacc aagatgtgaa gttcaccaaa gatacctatg ttcttgcttt
301 tgcaatttgc tacaaactga atagccctga gtctttcaaa atctgtacta cattaagaga
361 agaagctcta ctcaaaggag aaattctctc caggagagca tcctgtttcg ctgtggcatt
421 agctctgaat cagaatgaga tggcaaaagc tgtgtccatt ttttctcaaa tcatgaatcc
481 agaaagcata gcctgcatta atttaaatat tataatccat atccagtcaa atatgttgga
541 aaacctgata aagactctaa aaaatgctgc agaaggaaat ttatcaaaat ttgtgaaaag
601 acatgtgttc tcggaggaag tgctggccaa agtgagggaa aaagtgaagg atgtgcctgc
661 ccttgtggcc aaatttgatg agatctatgg gacactgcac atcactggcc aggtcaccac
721 tgattctttg gatgctgtgc tctgccacac ccccagggac aggaaatctc acacgttgct
781 attaaacaag aggatggtca gccgtcgcac cttccagcca ctcagccagt ccctgttggc
841 tgagtaaccc tggtttcagt ctacctatgg atctgagggg cctgcttcta gtgagttatt
901 acctttccta agaagccagg tatcgcactt cagcagacag tgtgctgaca cttggtcttc
961 tcctgaaatt cccaaattca ctgaatggta ccatgccgat ctctgagaag ttatgttgca
1021 ccactgtgaa ggtctagatg caagcttggc tccctcagaa aggcgcttcc cttttgcatg
1081 gctgaggatc cttgaaggaa cctggtcagt ctccggttca gcttccgaca ccagagtgga
1141 acccagtaag caccatcagg aatgaatttc actacaagtg tggataactc tgattttcaa
1201 aggagtagtt acttgcaaat tacatccttg ctgaattcag gaggtatgaa accctatttt
1261 accatgttag aaaacagccc aggattttct cattgctctg ccatcatata tgtctatgac
1321 ttgagccctt atttttccat ctgcaaaaca ataatgccta tgtgtctttg catatagatt
1381 tgaaatcttc attcaaggtt tagtaggatc atattttctc aaaaataaga gaaataaggt
1441 tcataagcaa acttgctggg attgtggttg ttttgttttc tcagcagcac aaacaaaacc
1501 agaatttagc ctttaggact gctgagtaag ccaaatttaa atgactactg ctttgttcat
1561 gggtaagcca tgtgcttttc aaaataagtg ccactaaaaa ccacataatg ctttggtttc
1621 tatgtggata ataaatattt agtcctatag ttt
//