LOCUS AK298636 1700 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54374 complete cds, highly similar to Homo
sapiens keratin 78 (KRT78), mRNA.
ACCESSION AK298636
VERSION AK298636.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1700)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1700
/clone="NESOP2000204"
/clone_lib="NESOP2"
/db_xref="H-InvDB:HIT000493260"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="esophagus"
CDS 678..1553
/codon_start=1
/note="highly similar to Homo sapiens keratin 78 (KRT78),
mRNA"
/protein_id="BAG60811.1"
/transl_table=1
/translation="MELEGKLEALREYLYFLKHLNEEELGQLQTQASDTSVVLSMDNN
RYLDFSSIITEVRARYEEIARSSKAEAEALYQTKYQELQVSAQLHGDRMQETKVQISQ
LHQEIQRLQSQTENLKKQNASLQAAITDAEQRGELALKDAQAKVDELEAALRMAKQNL
ARLLCEYQELTSTKLSLDVEIATYRRLLEGEECRMSGECTSQVTISSVGGSAVMSGGV
GGGLGSTCGLGSGKGSPGSCCTSIVTGGSNIILGSGKDPVLDSCSVSGSSAGSSCHTI
LKKTVESSLKTSITY"
BASE COUNT 373 a 479 c 529 g 319 t
ORIGIN
1 aacacacaca ccttgacaat ctgtctgtcc gtctgcagct gcgtgactgt ctgtctctgc
61 catgtctctc tccccatgcc gggcccagag gggcttcagc gctcgctcag cctgttctgc
121 tcgctcaagg ggccgcagca ggggaggctt cagcagcagg ggcggcttca gcagcaggag
181 ccttaattcc tttggggagt ggtgggcctg ggctctccct gtgccctccg gggggcatcc
241 aagaagtgac catcaaccag aatccgctga ccccactgaa gattgagatc gatccccagt
301 tccaggtggt gcggacgcag gagacccagg agatcagaac cctcaacaac cagtttgctt
361 ccttcattga caaggtgcgg ttcctggagc agcagaacaa ggtcctggag acgaagtggc
421 atctgctgca gcaacagggg ttgagtggca gccagcaggg cctggagcct gtctttgagg
481 cctgcctgga tcagctcagg aagcagctgg agcagctcca gggagaacga ggggctctgg
541 atgctgagtt gaaggcctgc cgggaccagg aggaggagta taagtccaag tatgaggagg
601 aggcccacag gcgtgccaca cttgagaacg actttgtggt cctcaagaag gatgtggatg
661 gggttttcct gagcaagatg gagttggagg gcaagctgga ggctctgaga gagtacctct
721 acttcttgaa gcatctgaat gaagaagagc tgggccagct ccagacccag gccagcgaca
781 cgtctgtggt gctgtccatg gacaacaacc gctacctgga cttcagcagc atcatcactg
841 aggtccgcgc ccggtacgag gagatcgccc ggagcagcaa ggctgaggct gaggctttgt
901 accagaccaa gtaccaggaa cttcaggtgt ctgcccagct tcatggggac aggatgcagg
961 aaacgaaagt ccagatctct cagctacacc aagagattca gaggctgcag agtcagactg
1021 agaacctcaa gaagcagaac gccagcctgc aggccgccat cactgatgct gagcagcgtg
1081 gggagctggc cctcaaggac gctcaggcca aggtggacga gctggaggct gctctgagga
1141 tggccaagca gaacctggcc cggctgctgt gcgagtacca ggagctgacg agcacgaagc
1201 tttccctgga tgtggagatt gccacttacc gcaggctgct ggagggcgag gagtgcagga
1261 tgtctgggga gtgcaccagc caggtcacta tctcctcggt gggaggcagc gctgtcatgt
1321 ctggaggagt tggtggaggc ttggggagca cttgtggact cggtagtggg aaaggcagcc
1381 ctgggtcctg ctgcaccagc attgtgactg gaggctccaa catcattctg ggctctggga
1441 aggaccctgt tttggattcc tgctctgtgt ctggctccag cgctggctcc agctgccaca
1501 ccatcctgaa gaagacagtt gagtcgagtc tgaagacatc catcacctac tgagcgaccc
1561 agcagccacc tccttcctga acacatttgg cccactcccc ccatcagccg gctctgcaag
1621 gccaactccg tgtccgctgc ccacagccca agccagccca cagcggatgc tgcaaaaatc
1681 aataaagtct cccctcctgc
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