LOCUS AK298580 3074 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ55896 partial cds, highly similar to PHD finger protein 3. ACCESSION AK298580 VERSION AK298580.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3074) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3074 /cell_type="normal mesangial cells (NHMC56046-2)" /clone="MESAN2015571" /clone_lib="MESAN2" /db_xref="H-InvDB:HIT000493204" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="primary culture, normal mesangial cells" /organism="Homo sapiens" CDS 493..>3074 /codon_start=1 /note="highly similar to PHD finger protein 3" /protein_id="BAG60771.1" /transl_table=1 /translation="MVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKCCAEEDK KTEILDPDTLENQATVEFHSGDKTMECEKLGLSKHTTNDRTKYIDDTVKHKVKILKRE SGEGRNSSDCRDNEIKKWQLAPLRKMGQPVLPRRSSEEKSEKIPKESTTVTCTGEKAS KPGTHEKQEMKKKKVEKGVLNVHPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLK VPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTP DHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQREVERRPITKITHKGEIEIESDA PMKEQEAAMEIQEPAANKSLEKPEGSEKQKEEVDSMSKDTTSQHRQHLFDLNCKICIG RMAPPVDDLSPKKVKVVVGVARKHSDNEAESIADALSSTSNILASEFFEEEKQESPKS TFSPAPRPEMPGTVEVESTFLARLNFIWKGFINMPSVAKFVTKAYPVSGSPEYLTEDL PDSIQVGGRISPQTVWDYVEKIKASGTKEICVVRFTPVTEEDQISYTLLFAYFSSRKR YGVAANNMKQVKDMYLIPLGATDKIPHPLVPFDGPGLELHRPNLLLGLIIRQKLKRQH SACASTSHIAETPESAPPIALPPDKKSKIEVSTEEAPEEENDFFNSFTTVLHKQRNKP QQNLQEDLPTAVEPLMEVTKQEPPKPLRFLPGVLIGWENQPTTLELANKPLPVDDILQ SLLGTTGQVYDQAQSVMEQNTVKEIPFLNEQTNSKIEKTDNVEVTDGENKEIKVKVDN ISESTDKSAEIETSVVGSSSISAGSLTSLSLRGKPPDVSTEAFLTNLSIQSKQEETVE SKKKT" BASE COUNT 1042 a 611 c 691 g 730 t ORIGIN 1 ctctccagct cccgcgccgc cgccgcacgc cgatggctgc ggggtctcgc gccgtcgcac 61 cgtccccacg cggcaagcga ccttcgggct cagggcggcg gcggctgcaa cgaggattag 121 gagggcggcg cggaagccaa gaatagtgtc gtcagcagca gccatttggt cccaggagga 181 aaagaggctg tggcagcgac gccgacgtcc tgcgcgtacc ccctctccgc ggcacccacc 241 gggccccctc ctcctcctct tcggcggcgg cagcgtccac catcttcctc ttgctgccag 301 tggtagcgct cgtctggcgg agctggttgt tggtcttgac gatattatgg atgaaggagt 361 tgttaaagaa agtggcaatg ataccattga tgaagaagaa ctgattttac ctaacaggaa 421 cttaagggac aaggtagaag aaaattcagt gagatctcca agaaaatcac ctcgtttaat 481 ggcacaaggt ttatggttgg ctgtgggaga tgtgatgact ggtttcatgg tgattgtgtt 541 gggttaagtc tttctcaagc acagcagatg ggcgaggaag acaaagaata tgtctgtgta 601 aaatgttgtg ctgaagaaga caaaaagact gaaatactag atccagatac tttggaaaac 661 caagctacag ttgaattcca tagtggagat aaaacaatgg agtgtgaaaa gcttggatta 721 tcaaaacaca caacaaatga tagaaccaaa tatatagatg atacagtgaa gcacaaggtc 781 aaaattttaa aacgggagtc tggtgaaggc agaaattcat cagactgtag agataatgaa 841 attaaaaaat ggcagctagc tcctcttcgt aagatgggac aaccagtttt acctcggaga 901 tcctcagaag aaaaaagtga aaaaataccg aaagagtcta caactgttac ttgcacagga 961 gaaaaagctt caaaaccagg tactcatgag aagcaagaga tgaaaaagaa gaaagttgaa 1021 aaaggagtgc ttaatgtaca tcctgctgct tctgcttcca agccttctgc agatcagatc 1081 aggcaaagtg tcagacattc tctcaaagac attcttatga agagacttac agactcaaat 1141 ttgaaggtac cagaggaaaa ggcagcaaaa gttgccacaa aaattgagaa agagcttttc 1201 tctttttttc gggacacaga tgctaaatat aagaacaaat atagaagttt gatgtttaat 1261 ttgaaagatc ctaaaaacaa tatattattt aaaaaagtac tgaaaggaga agtaactcct 1321 gatcatctta tcagaatgag tccagaagaa ctagcttcta aagagttagc tgcttggaga 1381 cgaagagaaa acagacatac catagaaatg attgagaaag agcagagaga agtggaacga 1441 cggccaatca ccaaaataac tcataaaggt gaaatagaaa ttgagagtga tgccccaatg 1501 aaagaacagg aagcagccat ggagattcag gaaccagccg ccaataagtc attggagaag 1561 ccagaaggat ctgaaaaaca aaaagaggag gttgactcta tgtctaaaga taccactagt 1621 caacacagac agcatctttt tgatctcaac tgcaaaatct gcataggtcg aatggcacca 1681 cctgtagatg atctttctcc aaaaaaagta aaagttgttg taggagtagc tcgcaaacat 1741 tcagacaatg aagcagaaag tatagcagat gcattatctt caacctcaaa tattttggct 1801 tctgaattct ttgaggagga gaaacaggag tctccaaagt caacgttctc tcctgctcca 1861 cgtccagaga tgcctggaac tgttgaagtt gagtctacct ttctggctcg attgaacttc 1921 atctggaaag gttttatcaa catgccttct gtggcaaaat ttgttaccaa agcctatcca 1981 gtatctggct ccccagaata cctgacagag gacctaccag atagtattca agtaggtggc 2041 aggatatcac ctcagacagt ttgggattat gtggaaaaaa taaaagcatc aggaaccaag 2101 gaaatttgtg tggttcgctt cacaccagta actgaagaag atcaaatttc ttatactttg 2161 ctctttgcat acttcagtag cagaaagcgc tatggagtag ctgctaacaa catgaagcag 2221 gttaaagata tgtaccttat tcctttgggt gccacagata aaattccaca ccctcttgtg 2281 ccttttgatg gacctgggct tgaactgcat agacctaatc tattgttggg cttaattatt 2341 cgtcagaaac tgaagcgaca gcacagtgcc tgtgctagta ctagtcatat agctgagact 2401 cctgaaagtg caccaccaat agcattgcca cctgataaaa aaagtaaaat agaagtttct 2461 acagaagaag caccagagga agaaaatgac ttttttaatt cttttacaac tgtattacac 2521 aagcagagaa ataaacctca gcagaatctt caggaagacc ttccaacagc agttgaacct 2581 ttaatggaag tcaccaaaca ggagccacca aaacctttaa gatttcttcc tggcgtgttg 2641 attggctggg agaatcaacc tactactctg gaattagcaa ataaacctct tcctgtggat 2701 gatatacttc aaagcctttt gggcaccact ggtcaagtat atgaccaggc ccagtcagtg 2761 atggaacaaa acactgttaa agaaattcca tttttaaatg agcagaccaa ctcaaaaata 2821 gagaaaacag ataatgtgga agtaactgat ggtgaaaaca aggagataaa agttaaagta 2881 gataatattt cagaatctac agataagtca gcagaaatag aaacatcagt agtagggtcc 2941 tcttccattt ctgcagggtc tttgacgagt cttagtctca gaggtaagcc accagatgtt 3001 tctacagaag catttttaac aaatttatca attcagtcaa aacaagagga aactgtggag 3061 agtaaaaaaa aaac //