LOCUS AK298578 2362 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53406 complete cds, highly similar to U3
small nucleolar RNA-associated protein 14 homolog A.
ACCESSION AK298578
VERSION AK298578.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2362)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2362
/cell_type="normal mesangial cells (NHMC56046-2)"
/clone="MESAN2015509"
/clone_lib="MESAN2"
/db_xref="H-InvDB:HIT000493202"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, normal mesangial cells"
/organism="Homo sapiens"
CDS 60..2219
/codon_start=1
/note="highly similar to U3 small nucleolar
RNA-associated protein 14 homolog A"
/protein_id="BAG60770.1"
/transl_table=1
/translation="MTANRLAESLLALSQQEELADLPKDYLLSESEDEGDNDGERKHQ
KLLEAISSLDGKNRRKLAERSEASLKVSEFNVSSEGSGEKLVLADLLEPVKTSSSLAT
VKKQLSRVKSKKTVELPLNKEEIERARTPLEQEIFNLLHKNKQPVTDPLLTPVEKASL
RAMSLEEAKMRRAELQRARALQSYYEAKARREKKIKSKKYHKVVKKGKAKKALKEFEQ
LRKVNPAAALEELEKIEKARMMERMSLKHQNSGKWAKSKAIMAKYDLEARQAMQEQLS
KNKELTQKLQVASESEEEEGGTEDVEELLVPDVVNEVQMNADGPNPWMLRSCTSDTKE
AATQEDPEQLPELEAHGVSESEGEERPVAEEEILLREFEERRSLRKRSELSQDAEPAG
SQETKDSGSQEVLSELRVLSQKLKENHQSRKQKASSEGTIPQVQREEPAPEEEEPLLL
QRPERVQTLEELEELGKEECFQNKELPRPVLEGQQSERTPNNRPDAPKEKKKKEQMID
LQNLLTTQSPSVKSLAVPTIEELEDEEERNHRQMIKEAFAGDDVIRDFLKEKREAVEA
SKPKDVDLTLPGWGEWGGVGLKPSAKKRRRFLIKAPEGPPRKDKNLPNVIINEKRNIH
AAAHQVRVLPYPFTHHWQFERTIQTPIGSTWNTQRAFQKLTTPKVVTKPGHIINPIKA
EDVGYRSSSRSDLSVIQRNPKRITTRHKKQLKKCSVG"
BASE COUNT 776 a 500 c 633 g 453 t
ORIGIN
1 aaaaattgct ttccttcggc ttctgttctt ggtccatgtg agagaagctg gctgctgaaa
61 tgactgcgaa ccggcttgca gagagccttc tggctttgag ccaacaggaa gaactagcgg
121 atttgccaaa agactacctc ttgagtgaga gtgaagatga gggggacaat gatggagaga
181 gaaagcatca aaagcttctg gaagcaatca gttcccttga tggaaagaat aggcggaaat
241 tggctgagag gtctgaggct agtctgaagg tgtcagagtt caatgtcagt tctgaaggat
301 caggagaaaa gctggtcctt gcagatctgc ttgagcctgt taaaacttca tcttctttgg
361 ccactgtgaa aaagcaactg agtagagtca aatcaaagaa gacagtggag ttacctctga
421 acaaagaaga gattgaacgg gcaagaactc ccctggagca ggaaattttc aacctcctcc
481 ataagaacaa gcagccagtg acagaccctt tactgacccc tgtggaaaag gcctctctcc
541 gagccatgag cctagaagag gcaaagatgc gacgagcaga gcttcagagg gctcgggctc
601 tgcagtccta ctatgaggcc aaggctcgaa gagagaagaa aatcaaaagt aaaaagtatc
661 acaaagtcgt gaagaaagga aaggccaaga aagccctaaa agagtttgag cagctgcgga
721 aggttaatcc agctgcagca ctagaagaac tggaaaaaat tgaaaaggcc agaatgatgg
781 aaagaatgag ccttaagcac caaaacagtg ggaaatgggc caagtcaaag gcaattatgg
841 ccaaatatga cctggaggct cgccaagcta tgcaggaaca gttgtctaag aacaaagaac
901 tgacacagaa actccaggta gcctctgaga gtgaggaaga ggagggaggc acagaagatg
961 tggaagaact ccttgtccct gatgtagtga atgaagtgca gatgaatgca gatgggccga
1021 atccctggat gctcaggagc tgcaccagtg acaccaaaga ggctgcaacc caggaggacc
1081 ctgagcaact gccagagctt gaggcccatg gagtttctga aagtgaggga gaagaaagac
1141 cagtggcaga agaagaaatt ttgttgagag aatttgagga aaggcgatcc cttagaaaaa
1201 gatctgagct cagccaagat gctgagccag caggcagtca agaaacaaaa gattctggca
1261 gccaggaggt gctgtctgaa ttgagagtac tatctcagaa attgaaggaa aaccatcagt
1321 ccaggaagca aaaagcaagt tcagagggga ctattcccca ggtccagaga gaggaacctg
1381 ccccagaaga agaggagccc ctgttgctac agagaccaga gagagtacag acgctggaag
1441 agctagaaga gctgggaaaa gaagaatgtt ttcaaaataa ggagcttccc agacctgtgt
1501 tagaagggca gcagtcagag aggaccccaa ataatcgccc tgatgcccct aaggagaaga
1561 aaaagaagga gcaaatgatc gacctacaga acctcctaac cacacaatct ccctccgtga
1621 agtctttggc agttcccaca atagaggagc tggaagatga agaggagaga aaccataggc
1681 agatgataaa ggaagctttt gctggggatg atgtcatcag agatttcttg aaagagaaga
1741 gggaagctgt ggaggcgagt aagccaaagg acgtggacct gacactacct ggctggggcg
1801 agtggggtgg tgtgggccta aagcccagtg ccaagaaaag acgccggttt ctcattaaag
1861 cccctgaggg tcctccaaga aaagataaga atttaccaaa tgtgattatc aatgagaagc
1921 gcaacatcca cgcagctgct catcaggtac gagtgcttcc atatccattt acccaccatt
1981 ggcaatttga aaggaccatc cagaccccca taggatccac atggaacacc cagagggctt
2041 tccaaaagct gactactccc aaggtcgtca ccaagccagg ccatatcatt aaccccataa
2101 aagcagaaga cgtgggctac cggtcttcct caaggtcgga cctgtctgtc atacagagga
2161 atccaaaacg aatcaccaca cgtcacaaaa aacagctgaa gaaatgctct gtaggttgag
2221 ttgctggagg agtgacagcc aggagccctg acttcacttc ctttggtcca gttttactct
2281 gatacagggt ggattccaaa actggctcag tacattgcat gtagttaagc cacattttaa
2341 aaataaaggc attttttaat ct
//