LOCUS AK298551 1282 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ54273 complete cds, highly similar to Sorting nexin-11. ACCESSION AK298551 VERSION AK298551.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1282) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1282 /cell_type="normal mesangial cells (NHMC56046-2)" /clone="MESAN2010750" /clone_lib="MESAN2" /db_xref="H-InvDB:HIT000493175" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="primary culture, normal mesangial cells" /organism="Homo sapiens" CDS 115..903 /codon_start=1 /note="highly similar to Sorting nexin-11" /protein_id="BAG60747.1" /transl_table=1 /translation="MVCREQEVITVRVQDPRVQNEGSWNSYVDYKIFLHTNSKAFTAK TSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKSTFFGTSDEFIEKRRQGLQHFLEKV LQSVVLLSDSQLHLFLQSQLSVPEIEACVQGRSTMTVSDAILRYAMSNCGWAQEERQS SSHLAKGDQPKSCCFLPRSGRRSSPSPPPSEEKDHLEVWAPVVDSEVPSLESPTLPPL SSPLCCDFGRPKEGTSTLQSVRRAVGGDHAVPLDPGQLETVLEK" BASE COUNT 289 a 299 c 362 g 332 t ORIGIN 1 atatggtggg gcgcgggcgg tgtcgctgtg gggagctggt gctgttctca gatgtttcct 61 tccaatgggc ttttggtgta ggatgtcgga gaaccaagaa caggaggtaa gagtatggtc 121 tgcagagaac aggaggtgat tacagtgcgt gttcaggacc cccgagtgca gaatgagggc 181 tcctggaact cttatgtgga ttataagata ttcctccata ccaacagcaa agcctttact 241 gccaagactt cctgtgtgcg gcgccgctac cgtgagttcg tgtggctgag aaagcagcta 301 cagagaaatg ctggtttggt gcctgttcct gaacttcctg ggaagtcaac cttcttcggc 361 acctcagatg agttcattga gaagcgacga caaggtctgc agcacttcct tgaaaaggtc 421 ctgcagagtg tggttctcct gtcagacagc cagttgcacc tattcctgca aagccagctc 481 tcggtgcctg agatagaagc ctgtgtccag ggccgaagta ccatgactgt gtctgatgcc 541 attcttcgat atgctatgtc aaactgtggc tgggcccagg aagagaggca gagctcttct 601 cacctggcta aaggagacca gcctaagagt tgctgctttc ttccaagatc gggtaggagg 661 agctctccct caccgcctcc cagtgaagaa aaggaccatt tagaagtgtg ggctccagtt 721 gttgactctg aggttccttc cttggaaagt cccactctcc cacccctctc ctcaccatta 781 tgctgtgatt ttggaagacc caaagaggga acctccactc ttcagtctgt gaggagggct 841 gtgggaggag atcatgctgt gcctttggac cctggtcagt tagaaacagt tttggaaaag 901 tgagctctcg gttctgctct gagatggtca gagaagatgc gggccaggag acttactcag 961 gtgggactgg gcacagggca ggtatgtggg aggctgggct gcttagtgtc ttctagtcac 1021 ctctgcttgg gctgattgac agaggtcagt cattacagcc ccttatgcct cttccatggg 1081 aacaaatact gtgcagatgt ttgtaagtta aacataagac acaggggctg ttgcttttga 1141 acagaaccct atattactct cctgggatct gagtttctgc aggtcatttg tatgtaggac 1201 caggagtatc tcctcaggtg accagttttg gggacccgta tgtggcaaat tctaagctgc 1261 catattgaac atcatcccac tg //