LOCUS AK298543 1471 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ50607 complete cds, highly similar to Pendrin. ACCESSION AK298543 VERSION AK298543.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1471) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1471 /cell_type="normal mesangial cells (NHMC56046-2)" /clone="MESAN2009971" /clone_lib="MESAN2" /db_xref="H-InvDB:HIT000493167" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="primary culture, normal mesangial cells" /organism="Homo sapiens" CDS 165..1190 /codon_start=1 /note="highly similar to Pendrin" /protein_id="BAH12811.1" /transl_table=1 /translation="MRHGLAVPSVLAAVVIANLKGMFMQLCDIPRLWRQSKIDAVIWV FTCIVSIILGLDLGLLAGLIFGLLTVVLRVQFPSWNGLGSIPSTDIYKSTKNYKNIEE PQGVKILRFSSPIFYGNVDGFKKCIKSTVGFDAIRVYNKRLKALRKIQKLIKSGQLRA TKNGIISDAVSTNNAFEPDEDIEDLEELDIPTKEIEIQVDWNSELPVKVNVPKVPIHS LVLDCGAISFLDVVGVRSLRVIVKEFQRIDVNVYFASLQDYVIEKLEQCGFFDDNIRK DTFFLTVHDAILYLQNQVKSQEGQGSILETITLIQDCKDTLELIETELTEEELDVQDE AMRTLAS" BASE COUNT 436 a 279 c 336 g 420 t ORIGIN 1 aaagctgtgc acatttcagg ctgcagctgt cagcagcagg aacttctgct gctttcattt 61 gagacggagc actgacaagc tctccagagc acatggtctt cagcgggtgc aggcaaatct 121 caaactgctg atgtccattc tcctgatgtt acctccaggc tcaaatgagg catgggctgg 181 ctgtcccatc ggtcttggca gctgttgtaa ttgccaacct gaaagggatg tttatgcagc 241 tgtgtgacat tcctcgtctg tggagacaga gtaagattga tgctgttatc tgggtgttta 301 cgtgtatagt gtccatcatt ctggggctgg atctcggttt actagctggc cttatatttg 361 gactgttgac tgtggtcctg agagttcagt ttccttcttg gaatggcctt ggaagcatcc 421 ctagcacaga tatctacaaa agtaccaaga attacaaaaa cattgaagaa cctcaaggag 481 tgaagattct tagattttcc agtcctattt tctatggcaa tgtcgatggt tttaaaaaat 541 gtatcaagtc cacagttgga tttgatgcca ttagagtata taataagagg ctgaaagcgc 601 tgaggaaaat acagaaacta ataaaaagtg gacaattaag agcaacaaag aatggcatca 661 taagtgatgc tgtttcaaca aataatgctt ttgagcctga tgaggatatt gaagatctgg 721 aggaacttga tatcccaacc aaggaaatag agattcaagt ggattggaac tctgagcttc 781 cagtcaaagt gaacgttccc aaagtgccaa tccatagcct tgtgcttgac tgtggagcta 841 tatctttcct ggacgttgtt ggagtgagat cactgcgggt gattgtcaaa gaattccaaa 901 gaattgatgt gaatgtgtat tttgcatcac ttcaagatta tgtgatagaa aagctggagc 961 aatgcgggtt ctttgacgac aacattagaa aggacacatt ctttttgacg gtccatgatg 1021 ctatactcta tctacagaac caagtgaaat ctcaagaggg tcaaggttcc attttagaaa 1081 cgatcactct cattcaggat tgtaaagata cccttgaatt aatagaaaca gagctgacgg 1141 aagaagaact tgatgtccag gatgaggcta tgcgtacact tgcatcctga aagtgggttc 1201 gggaggtctc tatgagcaag gaatacaaga caaaacttcc tcaatgcatt gactatttct 1261 tcagactcaa aacactcatt cttttttcta ttaagccatt gaaagagaag cactaagact 1321 gcttctaggc tttatttata aaataaacac cttatcccta acatgggcaa aatggctaga 1381 attattcaga cgatttggca gcgtccaggg taagctggtg ttataatacg ctgctgatct 1441 acatcacaga tttgctaata atgttcacgt g //