LOCUS AK298541 2466 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ56123 complete cds, highly similar to Calpastatin. ACCESSION AK298541 VERSION AK298541.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2466) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2466 /cell_type="normal mesangial cells (NHMC56046-2)" /clone="MESAN2009545" /clone_lib="MESAN2" /db_xref="H-InvDB:HIT000493165" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="primary culture, normal mesangial cells" /organism="Homo sapiens" CDS 212..2296 /codon_start=1 /note="highly similar to Calpastatin" /protein_id="BAH12810.1" /transl_table=1 /translation="MEGPHLPNKKKHKKQAVKTEPEKKSQSTKLSVVHEKKSQEGKPK EHTEPKSLPKQASDTGSNDAHNKKAVSRSAEQQPSEKSTEPKTKPQDMISAGGESVAG ITAISGKPGDKKKEKKSLTPAVPVESKPDKPSGKSGMDAALDDLIDTLGGPEETEEEN TTYTGPEVSDPMSSTYIEELGKREVTIPPKYRELLAKKEGITGPPADSSKPIGPDDAI DALSSDFTCGSPTAAGKKTEKEESTEVLKAQSAGTVRSAAPPQEKKRKVEKDTMSDQA LEALSASLGTRQAEPELDLRSIKEVDEAKAKEEKLEKCGEDDETIPSEYRLKPATDKD GKPLLPEPEEKPKPRSESELIDELSEDFDRSECKEKPSKPTEKTEESKAAAPAPVSEA VCRTSMCSIQSAPPEPATLKGTVPDDAVEALADSLGKKEADPEDGKPVMDKVKEKAKE EDREKLGEKEETIPPDYRLEEVKDKDGKPLLPKESKEQLPPMSEDFLLDALSEDFSGP QNASSLKFEDAKLAAAISEVVSQTPASTTQAGAPPRDTSQSDKDLDDALDKLSDSLGQ RQPDPDENKPMEDKVKEKAKAEHRDKLGERDDTIPPEYRHLLDDNGQDKPVKPPTKKS EDSKKPADDQDPIDALSGDLDSCPSTTETSQNTAKDKCKKAASSSKAPKNGGKAKDSA KTTEETSKPKDD" BASE COUNT 868 a 541 c 584 g 473 t ORIGIN 1 agagagctgg gctggagctc caagcggaaa ccgcgggagc cgagcccagc taggaatgca 61 gacctcctga aaaccaagcc gaggactgcg gggtccggtg tccacgcaga gtgtcagctt 121 cctctggtgc aaccagcaag tcttccagta tgaatcccac agaaaccaag gtatgaagaa 181 tgctaattga gccattccag tcagccaaca gatggaagga ccacatcttc ctaacaagaa 241 aaaacacaaa aaacaggctg taaaaacaga acctgagaag aagtcacagt caaccaagct 301 gtctgtggtt catgagaaaa aatcccaaga aggaaagcca aaagaacaca cagagccaaa 361 aagcctaccc aagcaggcat cagatacagg aagtaacgat gctcacaata aaaaagcagt 421 ttccagatca gctgaacagc agccatcaga gaaatcaaca gaaccaaaga ctaaaccaca 481 agacatgatt tctgctggtg gagagagtgt tgctggtatc actgcaatat ctggcaagcc 541 gggtgacaag aaaaaagaaa agaaatcatt aaccccagct gtgccagttg aatctaaacc 601 ggataaacca tcgggaaagt caggcatgga tgctgctttg gatgacttaa tagatacttt 661 aggaggacct gaagaaactg aagaagaaaa tacaacgtat actggaccag aagtttcaga 721 tccaatgagt tccacctaca tagaggaatt gggtaaaaga gaagtcacaa ttcctccaaa 781 atatagggaa ctattggcta aaaaggaagg gatcacaggg cctcctgcag actcttcgaa 841 acccataggg ccagatgatg ctatagacgc cttgtcatct gacttcacct gtgggtcgcc 901 tacagctgct ggaaagaaaa ctgaaaaaga ggaatctaca gaagttttaa aagctcagtc 961 agcagggaca gtcagaagtg ctgctccacc ccaagagaag aaaagaaagg tggagaagga 1021 tacaatgagt gatcaagcac tcgaggctct gtcggcttca ctgggcaccc ggcaagcaga 1081 acctgagctc gacctccgct caattaagga agtcgatgag gcaaaagcta aagaagaaaa 1141 actagagaag tgtggtgagg atgatgaaac aatcccatct gagtacagat taaaaccagc 1201 cacggataaa gatggaaaac cactattgcc agagcctgaa gaaaaaccca agcctcggag 1261 tgaatcagaa ctcattgatg aactttcaga agattttgac cggtctgaat gtaaagagaa 1321 accatctaag ccaactgaaa agacagaaga atctaaggcc gctgctccag ctcctgtgtc 1381 ggaggctgtg tgtcggacct ccatgtgtag tatacagtca gcaccccctg agccggctac 1441 cttgaagggc acagtgccag atgatgctgt agaagccttg gctgatagcc tggggaaaaa 1501 ggaagcagat ccagaagatg gaaaacctgt gatggataaa gtcaaggaga aggccaaaga 1561 agaagaccgt gaaaagcttg gtgaaaaaga agaaacaatt cctcctgatt atagattaga 1621 agaggtcaag gataaagatg gaaagccact cctgccaaaa gagtctaagg aacagctccc 1681 acccatgagt gaagacttcc ttctggatgc tttgtctgag gacttctctg gtccacaaaa 1741 tgcttcatct cttaaatttg aagatgctaa acttgctgct gccatctctg aagtggtttc 1801 ccaaacccca gcttcaacga cccaagctgg agccccaccc cgtgatacct cgcagagtga 1861 caaagacctc gatgatgcct tggataaact ctctgacagt ctaggacaaa ggcagcctga 1921 cccagatgag aacaaaccaa tggaagataa agtaaaggaa aaagctaaag ctgaacatag 1981 agacaagctt ggagaaagag atgacactat cccacctgaa tacagacatc tcctggatga 2041 taatggacag gacaaaccag tgaagccacc tacaaagaaa tcagaggatt caaagaaacc 2101 tgcagatgac caagacccca ttgatgctct ctcaggagat ctggacagct gtccctccac 2161 tacagaaacc tcacagaaca cagcaaagga taagtgcaag aaggctgctt ccagctccaa 2221 agcacctaag aatggaggta aagcgaagga ttcagcaaag acaacagagg aaacttccaa 2281 gccaaaagat gactaaagaa atacaagtta aggtatctgg tatctgcatg taaaatcttc 2341 agctggtgga tggtgacttt tgaagaacaa aaggctttgg caacagaaaa caattgttct 2401 gggtgatttc tagaatggtt tttgttgagt ctctgaacat cctaaatatt ggtttgttat 2461 tctttt //