LOCUS AK298537 1415 bp mRNA linear HUM 31-JUL-2008 DEFINITION Homo sapiens cDNA FLJ51930 complete cds, highly similar to Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 precursor (EC 1.14.11.4). ACCESSION AK298537 VERSION AK298537.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1415) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1415 /cell_type="normal mesangial cells (NHMC56046-2)" /clone="MESAN2008620" /clone_lib="MESAN2" /db_xref="H-InvDB:HIT000493161" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="primary culture, normal mesangial cells" /organism="Homo sapiens" CDS 432..1163 /codon_start=1 /note="highly similar to Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 precursor (EC 1.14.11.4)" /protein_id="BAG60737.1" /transl_table=1 /translation="MEKYADREDMIIMFVDSYDVILAGSPTELLKKFVQSGSRLLFSA ESFCWPEWGLAEQYPEVGTGKRFLNSGGFIGFATTIHQIVRQWKYKDDDDDQLFYTRL YLDPGLREKLSLNLDHKSRIFQNLNGALDEVVLKFDRNRVRIRNVAYDTLPIVVHGNG PTKLQLNYLGNYVPNGWTPEGGCGFCNQDRRTLPGGAASPPGVSGRVCGTAYSVSAPL PAAAATPGLSPRQGHPFPAQQRGLP" BASE COUNT 267 a 443 c 420 g 285 t ORIGIN 1 agcttccaca tgtgtcaagc ggctggctca gcccagagtc cctgtctccc gcccgccggc 61 ccgagccgcc gcccctcccc cgcctcccgt gcgcccggga caatcctcgc cttgtctgtg 121 gcgccggcat ctggagcttt ctgtagcctc cggatacgcc tttttttcag ggcgtagccc 181 cagccaagct gctgctgccc cctgcggcct cagcctccga ccggccccgg ggccgagacc 241 cggtcaaccc agagaagctg ctggtgatca ctgtggccac agctgaaacc gaggggtacc 301 tgcgtttcct gcgctctgcg gagttcttca actacactgt gcggaccctg ggcctgggag 361 aggagtggcg agggggtgat gtggctcgaa cagttggtgg aggacagaag gtccggtggt 421 taaagaagga aatggagaaa tacgctgacc gggaggatat gatcatcatg tttgtggata 481 gctacgacgt gattctggcc ggcagcccca cagagctgct gaagaagttc gtccagagtg 541 gcagccgcct gctcttctct gcagagagct tctgctggcc cgagtggggg ctggcggagc 601 agtaccctga ggtgggcacg gggaagcgct tcctcaattc tggtggattc atcggttttg 661 ccaccaccat ccaccaaatc gtgcgccagt ggaagtacaa ggatgatgac gacgaccagc 721 tgttctacac acggctctac ctggacccag gactgaggga gaaactcagc cttaatctgg 781 atcataagtc tcggatcttt cagaacctca acggggcttt agatgaagtg gttttaaagt 841 ttgatcggaa ccgtgtgcgt atccggaacg tggcctacga cacgctcccc attgtggtcc 901 atggaaacgg tcccactaag ctgcagctca actacctggg aaactacgtc cccaatggct 961 ggactcctga gggaggctgt ggcttctgca accaggaccg gaggacactc ccgggggggg 1021 cagcctcccc cccgggtgtt tctggccgtg tttgtggaac agcctactcc gtttctgccc 1081 cgcttcctgc agcggctgct actcctggac tatccccccg acagggtcac ccttttcctg 1141 cacaacaacg aggtcttcca tgaaccccac atcgctgact cctggccgca gctccaggac 1201 cacttctcag ctgtgaagct cgtggggccg gaggaggctc tgagcccagg cgaggccagg 1261 gacatggcca tggacctgtg tcggcaggac cccgagtgtg agttctactt cagcctggac 1321 gccgacgctg tcctcaccaa cctgcagacc ctgcgtatcc tcattgagga gaacaggaag 1381 gtgatcgccc ccatgctgtc ccgccacggc aagct //