LOCUS AK298514 2739 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ54534 complete cds, highly similar to Homo sapiens cysteinyl-tRNA synthetase (CARS), transcript variant 3, mRNA. ACCESSION AK298514 VERSION AK298514.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2739) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2739 /cell_type="normal mesangial cells (NHMC56046-2)" /clone="MESAN2003558" /clone_lib="MESAN2" /db_xref="H-InvDB:HIT000493138" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="primary culture, normal mesangial cells" /organism="Homo sapiens" CDS 52..2481 /codon_start=1 /note="highly similar to Homo sapiens cysteinyl-tRNA synthetase (CARS), transcript variant 3, mRNA" /protein_id="BAG60719.1" /transl_table=1 /translation="MADSSGQQAPDYRSILSISDEAARAQALNEHLSTRSYVQGYSLS QADVDAFRQLSAPPADPQLFHVARWFRHIEALLGSPCGKGQPCRLQASKGRRVQPQWS PPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDIL RRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQLLEDVQAALKP FSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDL LSDWLDSTFGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNF VQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISAD RLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGF DLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALKKHS ARQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKW GEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRASVSQCNLYMAARKAVRKRPNQ ALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVR KIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRV EEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENVSMVCPHMTWR AKSSAKGKPRS" BASE COUNT 714 a 689 c 758 g 578 t ORIGIN 1 agattctagg aagtgtctgt agccgcagct gcgggtccgg gattcccagc catggcagat 61 tcctccgggc agcaggctcc tgactacagg tccattctga gcattagtga cgaggcagcc 121 agggcacaag ccctgaacga gcacctcagc acgcgtagct atgtccaggg gtactcactg 181 tcccaggcag acgtggacgc gttcaggcag ctctcggccc cgcccgctga cccccagctc 241 ttccacgtgg ctcggtggtt caggcacata gaagcgctcc tgggtagccc ctgtggcaaa 301 ggccagccct gcaggctcca agcaagcaaa ggccggcgtg tgcagcccca gtggtcccct 361 cctgctggga cccagccatg cagactccac ctttacaaca gcctcaccag gaacaaggaa 421 gtgttcatac ctcaagatgg gaaaaaggtg acgtggtatt gctgtgggcc aaccgtctat 481 gacgcatctc acatggggca cgccaggtcc tacatctctt ttgatatctt gagaagagtg 541 ttgaaggatt acttcaaatt tgatgtcttt tattgcatga acattacgga tattgatgac 601 aagatcatca agagggcccg gcagaaccac ctgttcgagc agtatcggga gaagaggcct 661 gaagcggcac agctcttgga ggatgttcag gccgccctga agccattttc agtaaaatta 721 aatgagacca cggatcccga taaaaagcag atgctcgaac ggattcagca cgcagtgcag 781 cttgccacag agccacttga gaaagctgtg cagtccagac tcacgggaga ggaagtcaac 841 agctgtgtgg aggtgttgct ggaagaagcc aaggatttgc tctctgactg gctggattct 901 acatttggct gtgatgtcac tgacaattcc atcttctcca agctgcccaa gttctgggag 961 ggggacttcc acagagacat ggaagctctg aatgttctcc ctccagatgt cttaacccgg 1021 gttagtgagt atgtgccaga aattgtgaac tttgtccaga agattgtgga caacggttac 1081 ggctatgtct ccaatgggtc tgtctacttt gatacagcga agtttgcttc tagcgagaag 1141 cactcctatg ggaagctggt gcctgaggcc gttggagatc agaaagccct tcaagaaggg 1201 gaaggtgacc tgagcatctc tgcagaccgc ctgagtgaga agcgctctcc caacgacttt 1261 gccttatgga aggcctctaa gcccggagaa ccgtcctggc cgtgcccttg gggaaagggt 1321 cgtccgggct ggcatatcga gtgctcggcc atggcaggca ccctcctagg ggcttcgatg 1381 gacattcacg gaggtgggtt cgacctccgg ttcccccacc atgacaatga gctggcacag 1441 tcggaggcct actttgaaaa cgactgctgg gtcaggtact tcctgcacac aggccacctg 1501 actattgcag gctgcaaaat gtcaaagtca ctaaaaaact tcatcaccat taaagatgcc 1561 ttgaaaaagc actcagcacg gcagttgcgg ctggccttcc tcatgcactc gtggaaggac 1621 accctggact actccagcaa caccatggag tcagcgcttc aatatgagaa gttcttgaat 1681 gagtttttct taaatgtgaa agatatcctt cgcgctcctg ttgacatcac tggtcagttt 1741 gagaagtggg gagaagaaga agcagaactg aataagaact tttatgacaa gaagacagca 1801 attcacaaag ccctctgtga caatgttgac acccgcaccg tcatggaaga gatgcgggcc 1861 tcggtcagtc agtgcaacct ctatatggca gcccggaaag ccgtgaggaa gaggcccaac 1921 caggctctgc tggagaacat cgccctgtac ctcacccata tgctgaagat ctttggggcc 1981 gtagaagagg acagctccct gggattcccg gtcggagggc ctggaaccag cctcagtctc 2041 gaggccacag tcatgcccta ccttcaggtg ttatcagaat tccgagaagg agtgcggaag 2101 attgcccgag agcaaaaagt ccctgagatt ctgcagctca gcgatgccct gcgggacaac 2161 atcctgcccg agcttggggt gcggtttgaa gaccacgaag gactgcccac agtggtgaaa 2221 ctggtagaca gaaacacctt attaaaagag agagaagaaa agagacgggt tgaagaggag 2281 aagaggaaga agaaagagga ggcggcccgg aggaaacagg aacaagaagc agcaaagctg 2341 gccaagatga agattccccc cagtgagatg ttcttgtcag aaaccgacaa atactccaag 2401 tttgatgaaa atgtaagcat ggtctgccca cacatgacat ggagggcaaa gagctcagca 2461 aagggcaagc caagaagctg aagaagctct tcgaggctca ggagaagctc tacaaggaat 2521 atctgcagat ggcccagaat ggaagcttcc agtgaggggg cacaggactg actttttaaa 2581 ccattgtgga ctagtggctg ctgtctgcct cagtgacaat gtcccagcgc tcctatcatg 2641 tttacagtca cccttgggtc ctaaattaag agttgtgttc atgtaggttc gtgtcgtcgt 2701 tggctctgag acattgataa taaatttttc tcaacagtg //