LOCUS AK298393 1794 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ53849 complete cds, highly similar to Hepatocyte nuclear factor 1-beta. ACCESSION AK298393 VERSION AK298393.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1794) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1794 /clone="KIDNE2018977" /clone_lib="KIDNE2" /db_xref="H-InvDB:HIT000493017" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="kidney" CDS 381..1718 /codon_start=1 /note="highly similar to Hepatocyte nuclear factor 1-beta" /protein_id="BAG60628.1" /transl_table=1 /translation="MLSEDPWRAAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNK GTPMKTQKRAALYTWYVRKQREILRQFNQTVQSSGNMTDKSSQDQLLFLFPEFSQQSH GPGQSDDACSEPTNKKMRRNRFKWGPASQQILYQAYDRQKNPSKEEREALVEECNRAE CLQRGVSPSKAHGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSSNQTHSLNPLL SHGSPHHQPSSSPPNKLSGVRYSQQGNNEITSSSTISHHGNSAMVTSQSVLQQVSPAS LDPGHNLLSPDGKMIPVSGGGLPPVSTLTNIHSLSHHNPQQSQNLIMTPLSGVMAIAQ SLNTSQAQSVPVINSVAGSLAALQPVQFSQQLHSPHQQPLMQQSPGSHMAQQPFMAAV TQLQNSHMYAHKQEPPQYSHTSRFPSAMVVTDTSSISTLTNMSSSKQCPLQAW" BASE COUNT 437 a 606 c 440 g 311 t ORIGIN 1 agaagttttc tgactccttt cggaggagcc tccgggaccc cggggagtaa caggtgtctg 61 gaggctgaag ggtggagggg ttcctggatt tggggtttgc ttgtgaaact cccctccacc 121 ctcctctctc gcacccaccc accccctcat ccccgaactt cggggtgaag ctggagacgc 181 tgcccctgtc ccctggcagc ggggccgagc ccgacaccaa gccggtcttc catactctca 241 ccaacggcca cgccaagggc cgcttgtccg gcgacgaggg ctccgaggac ggcgacgact 301 atgacacacc tcccatcctc aaggagctgc aggcgctcaa caccgaggag gcggcggagc 361 agcgggcgga ggtggaccgg atgctcagtg aggacccttg gagggctgct aaaatgatca 421 agggttacat gcagcaacac aacatccccc agagggaggt ggtcgatgtc accggcctga 481 accagtcgca cctctcccag catctcaaca agggcacccc tatgaagacc cagaagcgtg 541 ccgctctgta cacctggtac gtcagaaagc aacgagagat cctccgacaa ttcaaccaga 601 cagtccagag ttctggaaat atgacagaca aaagcagtca ggatcagctg ctgtttctct 661 ttccagagtt cagtcaacag agccatgggc ctgggcagtc cgatgatgcc tgctctgagc 721 ccaccaacaa gaagatgcgc cgcaaccggt tcaaatgggg gcccgcgtcc cagcaaatct 781 tgtaccaggc ctacgatcgg caaaagaacc ccagcaagga agagagagag gccttagtgg 841 aggaatgcaa cagggcagaa tgtttgcagc gaggggtgtc cccctccaaa gcccacggcc 901 tgggctccaa cttggtcact gaggtccgtg tctacaactg gtttgcaaac cgcaggaagg 961 aggaggcatt ccggcaaaag ctggccatgg acgcctatag ctccaaccag actcacagcc 1021 tgaaccctct gctctcccac ggctcccccc accaccagcc cagctcctct cctccaaaca 1081 agctgtcagg agtgcgctac agccagcagg gaaacaatga gatcacttcc tcctcaacaa 1141 tcagtcacca tggcaacagc gccatggtga ccagccagtc ggttttacag caagtctccc 1201 cagccagcct ggacccaggc cacaatctcc tctcacctga tggtaaaatg atcccagtct 1261 caggaggagg tttgccccca gtcagcacct tgacgaatat ccacagcctc tcccaccata 1321 atccccagca atctcaaaac ctcatcatga cacccctctc tggagtcatg gcaattgcac 1381 aaagcctcaa cacctcccaa gcacagagtg tccctgtcat caacagtgtg gccggcagcc 1441 tggcagccct gcagcccgtc cagttctccc agcagctgca cagccctcac cagcagcccc 1501 tcatgcagca gagcccaggc agccacatgg cccagcagcc cttcatggca gctgtgactc 1561 agctgcagaa ctcacacatg tacgcacaca agcaggaacc cccccagtat tcccacacct 1621 cccggtttcc atctgcaatg gtggtcacag ataccagcag catcagtaca ctcaccaaca 1681 tgtcttcaag taaacagtgt cctctacaag cctggtgatg cccacacacc acttacttcg 1741 tgcgcaacaa caaggaccct gttttccaca ccatcaccct ctgggcagct gtca //