LOCUS AK298385 2550 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55935 partial cds, highly similar to Protein
FAM21C.
ACCESSION AK298385
VERSION AK298385.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2550)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2550
/clone="KIDNE2017965"
/clone_lib="KIDNE2"
/db_xref="H-InvDB:HIT000493009"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="kidney"
CDS 45..>2550
/codon_start=1
/note="highly similar to Protein FAM21C"
/protein_id="BAG60621.1"
/transl_table=1
/translation="MLSNTQFIENRVYDEEVEEPVLKAEAEKTEQEKTREQKEVDLIP
KVQEAVNYGLQVLDSAFEQLDIKAGNSDSEEDDANGRVELILEPKDLYIDRPLPYLIG
SKLFMEQEDVGLGELSSEEGSVGSDRGSIVDTEEEKEEEESDEDFAHHSDNEQNQHTT
QTSDEEEDDDGCDLFADSEKEEEDIEDIEENTRPKRSRPTSFADELAARIKGDAMGRV
DEEPTTLPSGEAKPRKTLKEKKERRTPSDDEEDNLFAPPKLTDEDFSPFGSGGGLFSG
GKGLFDDEDEESDLFTEAPQDRQAGASVKEESSSSKPGKKIPAGAVSVFLGDTDVFGA
ASVPSLKEPQKPEQPTPRKSPYGPPPTGLFDDDDGDDDDDFFSAPHSKPSKTRKVQST
ADIFGDEEGDLFKEKAVASPEATVSQTDENKARAEKKVTLSYSKNLKPSSETKTQKGL
FSDEEDSEDLFSSQSASNLKGASLLPGKLPTSVSLFDDEDEEDNLFGGTAAKKQTLSL
QAQREEKAKASELSKKKASALLFSSDEEDQWNIPASQTHLASDSRSKGEPRDSGTLQS
QEAKAVKKTSLFEEDKEDDLFAIAKDSQKKTQRVSLLFEDDVDSGGSLFGSPPTSVPP
ATKKKETVSEAPPLLFSDEEEKEAQLGVKSVDKKVESAKESLKFERTDVAESEKEGLL
TRSAQETVKHSDLFSSSSPWDKGTKPRTKTVLSLLDEEEDKMEDQNIIQAPQKEVGKG
CDPDAHPKSTGVFQDEELLFSHKLQKDNDPDVDLFAGTKKTKLLEPSVGSLFGDGEDD
DLFSSAKSQPLVQEKKRVVKKDHSVNSFKNQKHPESI"
BASE COUNT 798 a 550 c 648 g 554 t
ORIGIN
1 aagccacaga ttgtcgcctg cataatgtct tcaatgactt ccttatgctc tctaataccc
61 agttcataga gaatcgtgta tatgatgaag aagtggagga gccagtactc aaggctgagg
121 cagaaaaaac agagcaggag aagacacgag agcagaaaga agtagatctc attcctaaag
181 tccaggaggc tgtgaactat ggcttacaag tattggacag tgcctttgag caacttgata
241 tcaaagcagg aaactcagac tccgaggaag atgatgctaa tgggcgggtg gaactgatcc
301 ttgaaccaaa ggatctatac attgatcgtc ctttaccata tctcattggg tcaaagctgt
361 tcatggaaca agaagatgta ggtcttggag agctgtccag tgaagaaggc tctgtaggca
421 gtgatcgtgg cagtattgtg gacactgagg aagagaaaga agaggaggag tcagatgaag
481 attttgccca tcacagtgac aatgaacaaa accagcacac cacacaaacg agtgatgagg
541 aagaggatga tgatggctgt gacctttttg ctgactctga gaaggaggag gaagatattg
601 aggacattga agaaaatact agacctaaaa gaagcagacc tacatcgttt gcagatgagc
661 tggctgcccg catcaagggg gatgccatgg gtcgagtgga cgaggagccg acaaccttac
721 cctcaggaga agcaaaacct cggaagacac tcaaagagaa gaaggaaagg agaactcctt
781 cagacgatga agaggataac ttattcgcac cccccaagct gaccgacgag gacttctcgc
841 catttggctc tggaggtggc ctgttcagtg gcggcaaggg gctatttgat gatgaggacg
901 aggagagtga cctcttcacg gaagcccccc aggatcggca agctggagcc tctgttaagg
961 aggagtcttc atcatccaaa cctggaaaga aaatcccagc aggagctgtt tctgtatttt
1021 taggagacac ggatgtgttt ggtgctgcct ccgttccatc actgaaggag ccacagaagc
1081 ctgagcagcc cactccaagg aaaagcccct atggtccccc tcccactggc ctctttgatg
1141 atgatgatgg tgatgatgat gacgactttt tctcggcacc ccacagcaaa ccttctaaaa
1201 cacgcaaagt ccaatccact gccgatatct ttggtgacga agaaggagat ctgttcaaag
1261 aaaaagccgt agcatcgcca gaagccactg tgagtcagac agatgaaaat aaagcaagag
1321 cagaaaaaaa ggttacctta tcttacagca aaaatctcaa gccctcatca gaaacaaaga
1381 ctcaaaaagg cttattttca gatgaggagg actctgagga tttgttttct tctcaaagtg
1441 cgagtaactt aaaaggtgca tctctgctgc ctggcaagct ccccacgtcg gtttccctgt
1501 ttgatgatga agatgaagag gataatcttt ttgggggtac agctgctaag aagcagacat
1561 tgtctctaca agctcagaga gaagagaaag caaaagcctc cgagctctcc aaaaagaaag
1621 catctgccct gttgttcagc agtgatgagg aggaccagtg gaatattcct gcttcacaga
1681 cccacttagc atctgacagc aggtctaaag gagaacccag ggattctggg accctccaga
1741 gccaggaggc caaggctgtg aaaaagacca gtctctttga ggaagacaaa gaagatgatc
1801 tttttgccat tgccaaggac agccaaaaga agacccagag agtgtcactc ctctttgaag
1861 acgatgttga tagcggaggc tctctgtttg gctctcctcc cacatctgtt cctcctgcaa
1921 caaagaaaaa agagactgtc tctgaggcac cacctttgct gttcagcgat gaagaagaga
1981 aggaggcaca acttggagtg aagtctgtgg ataagaaggt tgagagtgcc aaggagtcat
2041 taaaatttga gagaactgat gtggctgagt cagaaaagga aggacttttg actagatctg
2101 ctcaggaaac agtcaagcat tctgatttat tttcttcatc atccccatgg gacaaaggaa
2161 ccaagcctag aaccaaaact gttcttagct tgcttgatga ggaagaggat aaaatggaag
2221 atcaaaacat tatccaggct ccacagaaag aagtaggaaa gggctgcgat cctgatgccc
2281 accccaagag cacaggtgtc ttccaggatg aagagctgct tttcagccac aagctccaaa
2341 aggacaatga cccagatgtt gacctttttg ctggcaccaa aaaaaccaag ctgttagagc
2401 caagtgttgg gagcctgttt ggggatggtg aagatgatga tcttttcagc tctgccaagt
2461 cccagccttt ggtacaagag aaaaagagag tagtgaaaaa agaccactct gttaactctt
2521 tcaaaaacca gaaacatcct gaatccattc
//