LOCUS AK298314 2507 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53474 complete cds, highly similar to Homo
sapiens ubiquitin protein ligase E3 component n-recognin 4 (UBR4),
mRNA.
ACCESSION AK298314
VERSION AK298314.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2507)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2507
/clone="KIDNE2011432"
/clone_lib="KIDNE2"
/db_xref="H-InvDB:HIT000492938"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="kidney"
CDS 69..2189
/codon_start=1
/note="highly similar to Homo sapiens ubiquitin protein
ligase E3 component n-recognin 4 (UBR4), mRNA"
/protein_id="BAG60568.1"
/transl_table=1
/translation="MRIVYRMRGLLGDATEEFIESLDSTTDEEEDEEEVYKMAGVMAQ
CGGLECMLNRLAGIRDFKQGRHLLTVLLKLFSYCVKVKVNRQQLVKLEMNTLNVMLGT
LNLGNLLLTGDKDQLVMLLDQINSTFVRSNPSVLQGLLRIIPYLSFGEVEKMQILVER
FKPYCNFDKYDEDHSGDDKVFLDCFCKIAAGIKNNSNGHQLKDLILQKGITQNALDYM
KKHIPSAKNLDADIWKKFLSRPALPFILRLLRGLAIQHPGTQVLIGTDSIPNLHKLEQ
VSSDEGIGTLAENLLEALREHPDVNKKIDAARRETRAEKKRMAMAMRQKALGTLGMTT
NEKGQVVTKTALLKQMEELIEEPGLTCCICREGYKFQPTKVLGIYTFTKRVALEEMEN
KPRKQQGYSTVSHFNIVHYDCHLAAVRLARGREEWESAALQNANTKCNGLLPVWGPHV
PESAFATCLARHNTYLQECTGQREPTYQLNIHDIKLLFLRFAMEQSFSADTGGGGRES
NIHLIPYIIHTVLYVLNTTRATSREEKNLQGFLEQPKEKWVESAFEVDGPYYFTVLAL
HILPPEQWRATRVEILRRLLVTSQARAVAPGGATRLTDKAVKDYSAYRSSLLFWALVD
LIYNMFKKVPTSNTEGGWSCSLAEYIRHNDMPIYEAADKALKTFQEEFMPVETFSEFL
DVAGLLSEITDPESFLKDLLNSVP"
BASE COUNT 615 a 670 c 672 g 550 t
ORIGIN
1 ttagtttgga ccttcctgtg gctgaagttt acaagaaagt ctggtgtacc acgaatgagg
61 gagagcccat gaggattgtt tatcgtatgc gggggctgct gggcgatgcc acagaggagt
121 tcattgagtc cctggactct actacagatg aagaagaaga tgaagaagaa gtgtataaaa
181 tggctggtgt gatggcccag tgtgggggcc tggaatgcat gcttaacaga ctcgcaggga
241 tcagagattt caagcaggga cgccaccttc taacagtgct actgaaattg ttcagttact
301 gcgtgaaggt gaaagtcaac cggcagcaac tggtcaaact ggaaatgaac accttgaacg
361 tcatgctggg gaccctaaac ctgggcaacc tcctcctgac aggtgacaag gatcaactgg
421 tgatgctctt ggaccagatc aacagcacct ttgttcgctc caaccccagt gtgctccagg
481 gcctgcttcg catcatcccg tacctttcct ttggagaggt ggagaaaatg cagatcttgg
541 tggagcgatt caaaccatac tgcaactttg ataaatatga tgaagatcac agtggtgatg
601 ataaagtctt cctggactgc ttctgtaaaa tagctgctgg catcaagaac aacagcaatg
661 ggcaccagct gaaggatctg attctccaga aggggatcac ccagaatgca cttgactaca
721 tgaaaaagca catccctagc gccaagaatt tggatgccga catctggaaa aagtttttgt
781 ctcgcccagc cttgccattt atcctaaggc tgcttcgggg cctggccatc cagcaccctg
841 gcacccaggt tctgattgga actgattcca tcccgaacct gcataagctg gagcaggtgt
901 ccagtgatga gggcattggg accttggcag agaacctgct ggaagccctg cgggaacacc
961 ctgacgtaaa caagaagatt gacgcagccc gcagggagac ccgggcagag aagaagcgca
1021 tggccatggc aatgaggcag aaggccctgg gcaccctggg catgacgaca aatgaaaagg
1081 gccaggtcgt gaccaagaca gcactcctga agcagatgga agagctgatc gaggagcctg
1141 gcctcacgtg ctgcatctgc agggagggat acaagttcca gcccacaaag gtcctgggca
1201 tttatacctt cacgaagcgg gtagccttgg aggagatgga gaataagccc cggaaacagc
1261 agggctacag caccgtgtcc cacttcaaca ttgtgcacta cgactgccat ctggctgccg
1321 tcaggttggc tcgaggccgg gaagagtggg agagtgccgc cctgcagaat gccaacacca
1381 agtgcaacgg gctccttccg gtctggggac ctcatgtccc tgaatcagct tttgccactt
1441 gcttggcaag acacaacact tacctccagg aatgtacagg ccagcgggag cccacgtatc
1501 agctcaacat ccatgacatc aaactgctct tcctgcgctt cgccatggag cagtcgttca
1561 gcgcagacac tggcgggggc ggccgggaga gcaacatcca cctgatcccg tacatcattc
1621 acactgtgct ttacgtcctg aacacaaccc gagcaacttc ccgagaagag aagaacctcc
1681 aaggctttct ggaacagccc aaggagaagt gggtggagag tgcctttgaa gtggacgggc
1741 cctactattt cacagtcttg gcccttcaca tcctgccccc tgagcagtgg agagccacac
1801 gtgtggaaat cttgcggagg ctgttggtga cctcgcaggc tcgggcagtg gctccaggtg
1861 gagccaccag gctgacagat aaggcagtga aggactattc cgcttaccgt tcttcccttc
1921 tcttttgggc cctcgtcgat ctcatttaca acatgtttaa gaaggtgcct accagtaaca
1981 cagagggagg ctggtcctgc tctctcgctg agtacatccg ccacaacgac atgcccatct
2041 acgaagctgc cgacaaagcc ctgaaaacct tccaggagga gttcatgcca gtggagacct
2101 tctcagagtt cctcgatgtg gccggtcttt tatcagaaat caccgatcca gagagcttcc
2161 tgaaggacct gttgaactca gtcccctgac caccacacag cagctgcggc ggcgaagacg
2221 aagctggctt gccttccacc ctctgttctc cctccttgtg cattaagttc cctccgcggg
2281 atgctgcatt gttaccccgc cctcccctct ctcatttttc ttggtgtggc ttggggtttt
2341 taggcttcct gttttatctc gtgtgtgtgg tgcaccagct atgaggttgt ctgtaaccca
2401 agccatcaaa gggcttgtac atacctagga gccatgagtt gtcccggcca gcttcatact
2461 tgagtgtgca catcttgaga aataaacaag tgacttaaca cacattg
//