LOCUS AK298300 1150 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ59040 complete cds, highly similar to LINE-1
reverse transcriptase homolog.
ACCESSION AK298300
VERSION AK298300.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1150)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1150
/clone="KIDNE2009698"
/clone_lib="KIDNE2"
/db_xref="H-InvDB:HIT000492924"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="kidney"
CDS 264..803
/codon_start=1
/note="highly similar to LINE-1 reverse transcriptase
homolog"
/protein_id="BAH12753.1"
/transl_table=1
/translation="MSELPFTIASKRIKYLRIQLTRDVKDLFKKNYKPLLNEIKEDTN
KWKNIPCSWIGRIVKMAILPKVIYRFNAIPIKLPMTFFTKLEKTTLKFIWNQKRALIA
KTIISKKNKAGGITLPDFKLCYKATVTKTACCWYLNRDIDQWNRTEVSEITIHIYNHL
IFDKPDKNKQWGKDSLFNK"
BASE COUNT 468 a 236 c 213 g 233 t
ORIGIN
1 atatctcagg ctgatctaaa agaactggaa acaaaaaaga agatttccca ggtgatctgg
61 gcagcctcta ccaatgtgat gcgaatgatg agaatgtgat ggcgaagatg aggagcccct
121 gacaaacgta gtcgggaatg acgaaaactg tccagcagca acagaaccct ggtggaccag
181 atgaccttag aaaacacaaa atcaatgtgc aaaaatcatg agcattccta tacacaaata
241 acagacaaac agagagccaa atcatgagtg aactcccatt cacaattgct tcaaagagaa
301 taaaatacct aagaattcaa cttacaaggg atgtgaagga cctcttcaag aagaactaca
361 aaccactgct caatgaaata aaagaggaca caaacaaatg gaagaacatt ccatgctcat
421 ggataggaag aatcgtgaaa atggccatac tacctaaggt aatttataga ttcaatgcca
481 ttcccatcaa gctaccaatg actttcttca caaaactgga aaaaactact ttaaagttca
541 tatggaacca aaaaagagcc ctcattgcca agacaatcat aagcaaaaag aacaaagctg
601 gaggcatcac actgcctgac tttaaactat gctacaaggc tacagtaacc aaaacagcat
661 gctgctggta cctaaacaga gatatagacc aatggaacag aacagaggtc tcagaaataa
721 caatacacat ctacaaccat ctgatctttg acaaacctga caaaaacaag caatggggaa
781 aggattccct atttaataaa tagtgctggg aaaactggct agccatatgt agaaagctga
841 aactggatcc cttccttaca ccttatacaa aaattaattc aagatggatt aaagacttac
901 atgttagacc taaaaccata aaaaccctag atgaaaacct aggtaatacc attcgggaca
961 gaggcatggg caaggacttc gtgactaaaa caccaaaagt aatgacaaca aaagccaaaa
1021 tagacaaatg ggatctaatt aaactgaaga gcttctgcac aggaaaagaa actaccatca
1081 gagtgaacag gcaacctaca gaatgggaga aaatttttgt agtctactca tctgacaaag
1141 ggctaatatc
//