LOCUS AK298296 2367 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58154 complete cds, highly similar to
Protocadherin beta 14 precursor.
ACCESSION AK298296
VERSION AK298296.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2367)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2367
/clone="KIDNE2009315"
/clone_lib="KIDNE2"
/db_xref="H-InvDB:HIT000492920"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="kidney"
CDS 239..2176
/codon_start=1
/note="highly similar to Protocadherin beta 14 precursor"
/protein_id="BAG60554.1"
/transl_table=1
/translation="MESAQDLDVGSNSLQNYTISPNSHFYIKIPDSSDRKIYPELVLD
RALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPEDR
PLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLDFEVIQ
SYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENASETLVALFSIL
DQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNITITVTDLGTP
RLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVN
YSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEA
LVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLS
YQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVL
LVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA
ASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVH
DTGRNMGEIENFRNSFGLNIQ"
BASE COUNT 577 a 637 c 602 g 551 t
ORIGIN
1 actgaaaaga caggcattaa aggagcttcg cctacagagc tgctggagga tacactctcc
61 agggggttcc tgttaaaaac cagagcttca gcttccaaaa ttacggctga gcttcagttt
121 ttccacaaga gattgcctaa aggaaccatg gagatcagag gggcactcga tctgcgaaaa
181 agacaaggaa atacttatta aaatatcaga aggtaccact gttggagcta cctttctaat
241 ggagagtgct caagatttgg atgtcggaag caacagtctc caaaactaca caattagccc
301 caattctcac ttctacatta aaattcccga cagtagtgac agaaagatat acccagagct
361 ggtcctagat agagctttag attatgaaca ggaagctgaa ctcagattaa cactcacagc
421 agtggatggt ggatccccgc ccaagtctgg gacaactttg gttctcatca aggtgttgga
481 catcaatgat aatgcccctg agtttcctca gagtctctat gaggtgcaag tccccgagga
541 cagacccctt ggctcctgga ttgccaccat ctcagctaag gatctggatg caggaaacta
601 tggaaaaata tcttacacat ttttccatgc atcagaagat attcgtaaaa catttgaaat
661 taatccaata tctggggaag ttaatttgag atcacccctg gattttgaag taatacagtc
721 ctacactata aatattcagg caacagatgg tgggggtctt tcaggaaaat gcacccttct
781 agttaaagtt atggatataa acgacaaccc accagaagtg accatatcgt cgattacaaa
841 gagaattcca gagaatgcct cagagaccct agtagctctt tttagtatcc tagaccaaga
901 ctctggagac aatgggagga tgatttgctc tattcaagat aacctccctt ttttcctgaa
961 accgaccttc aagaactttt tcactctagt ttctgaaaaa gcactggaca gagagagcca
1021 agccgagtac aacatcacga tcaccgtcac agacttgggg acacccaggc tgaaaaccga
1081 gtacaacata accgtgctgc tctctgacgt caatgacaac gcccccacct tcacccaaac
1141 ctcctacacc ctgttcgtcc gcgagaacaa cagccccgcc ctgcacatcg gcagcgtcag
1201 cgccacagac agagactcag gcaccaacgc ccaggtcaac tactcgctgc tgccgcccca
1261 ggaccggcac ctgcccctcg cctccttggt ctccatcaac gcggacaatg gccacctgtt
1321 tgccctcagg tcgctggact acgaggccct acaggagttc gagtttcgcg tgggcgccac
1381 agaccgcggg tccccggcgt tgagcagcga ggcgctggtg cgcgtgctgg tgctggacgc
1441 caacgacaac tcgcccttcg tgctgtaccc gctgcagaac ggctccgcgc cctgcaccga
1501 gctggtgccc cgggcggccg agccgggcta cctggtgacc aaggtggtgg cggtggacgg
1561 cgactcgggc cagaacgcct ggctgtcgta ccagctgctc aaggccacgg agcccgggct
1621 gttcggcgtg tgggcgcaca atggcgaggt gcgcaccgcc aggctgctga gcgagcgcga
1681 cgcggccaag cacaggctgg tggtgctggt caaggacaat ggcgagcctc cgcgctcggc
1741 caccgccacg ctgcacgtgc tcctggtgga cggcttctcc cagccctacc tgccgctccc
1801 tgaggcggcc ccggcccagg cccaggccga ctccctcacc gtctacctgg tggtggcatt
1861 ggcctcggtg tcgtcgctct tcctcttctc ggtgctcctg ttcgtggcgg tgcggctgtg
1921 caggaggagc agggcggcct cggtgggtcg ctgctcggtg cccgagggtc cctttccagg
1981 gcatctggtg gacgtgagcg gcaccgggac cctgtcccag agctaccaat acgaggtgtg
2041 tctgacagga ggttccggga caaatgagtt caaatttctg aagccgatta tccccaattt
2101 tcaagttcat gacactggta ggaatatggg ggaaatcgag aactttcgaa atagctttgg
2161 acttaacatt caataaaaca atttatttta aatgtctaat ttttggttat tcttggcaag
2221 ctgatggtac tttttgcata atcttttgtg gattcttggt tgtactgtag ttgcatgcat
2281 gattatagct cttgtttttc tcacagtttc tttaaaaatc tttattagtg gctataatga
2341 cgtggaaatg taatctgtgt tttctgg
//