LOCUS AK298270 1468 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ52713 complete cds, moderately similar to Mus
musculus leucine rich repeat (in FLII) interacting protein 1
(Lrrfip1), mRNA.
ACCESSION AK298270
VERSION AK298270.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1468)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1468
/clone="KIDNE2003595"
/clone_lib="KIDNE2"
/db_xref="H-InvDB:HIT000492894"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="kidney"
CDS 124..1308
/codon_start=1
/note="moderately similar to Mus musculus leucine rich
repeat (in FLII) interacting protein 1 (Lrrfip1), mRNA"
/protein_id="BAG60532.1"
/transl_table=1
/translation="MTSPAAAQSREIDCLSPEAQKLAEARLAAKRAARAEAREIRMKE
LERQQKEVEERPEKDFTEKGSRNMPGLSAATLASLGGTSSRRGSGDTSISIDTEASIR
EIKDSLAEVEEKYKKAMVSNAQLDNEKTNFMYQVDTLKDMLLELEEQLAESRRQYEEK
NKEFEREKHAHSILQFQFAEVKEALKQREEMLEKHGIILNSEIATNGETSDTLNNVGY
QGPTKMTKEELNALKSTGDGTLDIRLKKLVDERECLLEQIKKLKGQLEERQKIGKLDN
LRSEDDVLENGTDMHVMDLQRDANRQISDLKFKLAKSEQEITALEQNVIRLESQVSRY
KSAAENAEKIEDELKAEKRKLQRELRSALDKTEELEVSNGHLVKRLEKMKANRSALLS
QQ"
BASE COUNT 447 a 341 c 412 g 268 t
ORIGIN
1 acttagcggc gagtggctcc gtctccgcgg acagagcgcg cgccccctgg cccggcccgc
61 gaggggctcc cggcgcggtc cccgagcatt tcccgccggg tggagcgggc cgagcccggc
121 aggatgacca gccccgcggc cgctcaaagc cgggagatcg actgtttgag cccggaagcg
181 cagaagctgg cggaagcccg gctcgctgca aaacgggcgg cccgcgcgga ggctcgcgag
241 atccgcatga aggagctgga gcggcagcag aaggaggtag aagagagacc agaaaaagat
301 tttactgaga aggggtctcg taacatgccg ggcctgtctg cagccacgct ggcctctctg
361 ggtgggactt cctctcggag aggcagcgga gacacctcca tctccatcga caccgaggca
421 tccatcaggg aaatcaagga ctctctagca gaagttgaag agaaatataa gaaggctatg
481 gtttccaatg ctcagctaga caatgaaaag acaaacttca tgtaccaggt tgatacccta
541 aaagatatgt tgctggagct tgaagaacag ctggctgaat ctaggcggca gtacgaagag
601 aaaaacaaag aatttgaaag ggaaaaacac gcccacagta tactgcaatt tcagtttgct
661 gaagtcaagg aggccctgaa gcaaagagag gaaatgctcg agaaacatgg aataatccta
721 aattcagaaa tagctaccaa tggagagact tccgacaccc tcaataatgt tggataccaa
781 ggtcctacca agatgacaaa agaagagtta aatgccctca agtcgacagg ggatgggacc
841 ctagatatta ggttgaaaaa gctggttgat gaacgggaat gcttattgga acagattaag
901 aaactcaaag ggcagctgga ggagagacag aagattggca aactagacaa tcttcgatct
961 gaagatgatg tcttggaaaa cgggacagac atgcatgtaa tggacctaca aagggatgcc
1021 aacagacaga tcagcgacct caaatttaaa cttgcaaaat ctgagcaaga gataactgca
1081 ttagaacaaa atgtaataag gttagagagt caagtatcac gttacaaatc agcggctgaa
1141 aatgcagaaa aaatagaaga tgaacttaag gcagaaaaac ggaaactcca aagagagctc
1201 cgctctgcat tggataaaac agaagagctc gaggtgagca acggccactt agtgaagcgt
1261 ctggaaaaaa tgaaagcaaa tcggagtgca ctcttgtccc agcagtaaat tccagctctg
1321 atcaggcaac tggttggtga ctggagagca ttgtttcata ggcttttctc tgtcctgtct
1381 gggagcgctg cttcttcccc tgccttccga gagacgaaga ccgtggcgag cttggcgctt
1441 aggggctccc gtgccatggc tcacccca
//