LOCUS AK298244 2566 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56121 complete cds, highly similar to Nuclear
valosin-containing protein-like.
ACCESSION AK298244
VERSION AK298244.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2566)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2566
/cell_type="leukemia cell line (myelogenous)"
/clone="JCMLC2001851"
/clone_lib="JCMLC2"
/db_xref="H-InvDB:HIT000492868"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 12..2309
/codon_start=1
/note="highly similar to Nuclear valosin-containing
protein-like"
/protein_id="BAG60510.1"
/transl_table=1
/translation="MKPRPAGFVDNKLKQRVIQYLTSNKCGKYVDIGVLASDLQRVYS
IDYGRRKRNAFRIQVEKVFSIISSEKELKNLTELEDEHLAKRARQGEEDNEYTESYSD
DDSSMEDYPDPQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAK
ARGLEFQISNVKFEDVGGNDMTLKEVCKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGC
GKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEID
AITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGR
FDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAM
CAVNRVLMKLQEQQKKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQDPL
SEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILA
PVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG
ESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEAR
QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDAD
VNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEA
FKKVRSSISKKDQIMYERLQESLSR"
BASE COUNT 780 a 530 c 640 g 616 t
ORIGIN
1 agaccgacgc gatgaagccc agacctgcag ggttcgtgga taataaactc aagcagcgag
61 tcatccagta ccttaccagt aacaaatgtg gcaaatatgt ggacattgga gtcttagcgt
121 ctgatttaca aagagtgtac agtatagact atggtcgaag aaaaagaaat gcttttagga
181 ttcaggtaga aaaagtattt agcataatta gtagtgagaa ggaacttaag aatttaacag
241 aattagaaga tgaacatttg gcaaaaaggg caagacaagg tgaagaggat aatgagtata
301 ctgaaagcta ttctgatgat gattcaagta tggaagacta cccagatcca caggattcaa
361 aagattcttc tcttttggag agtgatatga aacggaaagg caagctaaag aataaaggaa
421 gcaaaaggaa gaaagaagat cttcaggaag tagatggaga aattgaagct gtcctacaaa
481 agaaagctaa agccaggggg ttagaattcc agatctccaa cgtgaagttt gaagatgtgg
541 gaggcaatga tatgacatta aaagaggtct gcaagatgct catacacatg cgtcacccgg
601 aggtgtacca ccacctgggc gtcgtgcccc ctcgtggagt tctccttcat ggaccaccag
661 gctgtgggaa gacattactt gcacatgcaa ttgctgggga acttgacctg ccaattttga
721 aagtggctgc tccagagatt gtgtctggag tatccggaga gtctgagcag aagctgagag
781 aactatttga gcaagctgtg tcaaatgcac catgtatcat tttcattgat gaaattgatg
841 ctattacccc caaaagagaa gtggcttcaa aagatatgga acgaagaatt gtagcccaac
901 tcctaacctg catggatgat ctgaataatg tggctgctac agcccgggtc ctagttattg
961 gagctactaa tcgaccagac tcgttagacc ctgctttgag acgtgcggga aggttcgacc
1021 gagaaatatg cctaggtatc ccagatgaag catccaggga aagaatactt caaacattgt
1081 gcagaaaact gaggcttcct caagcttttg atttctgtca cttagcacac ctaactccag
1141 gctttgttgg tgctgatctc atggcactgt gccgagaggc agcaatgtgt gcagtcaata
1201 gagtcttaat gaagctacag gaacagcaga agaaaaatcc tgaaatggaa gatttgccat
1261 ctaaaggagt ccaggaggaa aggctgggaa ctgagcccac ttctgaaaca caggatgaat
1321 tacaaaggct gctggggttg ctaagagacc aagatcccct ctcagaggag cagatgcaag
1381 gactgtgcat tgaactgaat gatttcattg ttgctctatc ctcagtccaa ccctctgcca
1441 aaagggaagg ctttgtcact gtccctaatg tgacatgggc agatattggt gccctggaag
1501 acattagaga ggagctcacc atggcaatat tggcaccagt acgcaaccca gaccagttca
1561 aagctcttgg attggtgact ccagctgggg tcctccttgc tggtcctcct ggctgtggga
1621 agactctgct ggcgaaggct gttgcaaatg agtccggact aaattttata tctgtcaagg
1681 gccccgaatt actaaacatg tatgttggtg agagtgaacg tgctgtgcga caagtttttc
1741 aacgagccaa gaactcagca ccctgtgtga tattctttga tgaagtggat gctttatgtc
1801 ctcgaagatc agaccgagag acaggggcaa gtgtccgagt ggtgaatcag ctacttacag
1861 agatggatgg tctggaagca cgccagcagg tttttattat ggcagccact aacaggccag
1921 atataattga ccctgcaatc ctgcgcccgg gccgcctgga caaaacactg tttgtgggtt
1981 taccgccccc tgcagatcgc cttgccatct taaaaactat cacaaaaaat ggtaccaaac
2041 caccactgga tgcagatgta aatttggaag caattgctgg tgaccttcgc tgtgattgct
2101 atacgggcgc agatctctct gctttggtac gagaagcttc tatctgtgcc ctgagacagg
2161 aaatggcaag acagaagagt ggaaatgaaa aaggtgaact caaggttagt cataagcatt
2221 ttgaagaagc tttcaagaaa gtaagatcat ctatatcaaa aaaggatcaa atcatgtatg
2281 aacgtttgca ggagtccctc agccggtgat gtctccagca gccggcttag aggagctagc
2341 ccatcaagcc ggcagagaat cccccacacg ctctgaagga cccactttca gctggacaca
2401 ggcgcggcct catgtaaaca ttttattttc aaatgaatga ggccaagctg aagctgaagc
2461 tgaagattct tcccatctgg ccagccttgt gtgaaaatgc cttcttcctc tttaagaaaa
2521 aggacaattt ttaaactgct gaaataaaat gactgttaca tttttc
//